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Re: [PATCH v3 17/20] fsck: verify commit-graph

From
Derrick Stolee <stolee@gmail.com>
Date
Jun 4, 2018, 11:59 UTC
Message-ID
<c1fa14f3-f1cc-a91f-6192-e97e6437d0c4@gmail.com>
In-Reply-To
<867enhtb6n.fsf@gmail.com>
On 6/2/2018 12:17 PM, Jakub Narebski wrote:
Show 22 quoted lines
> Derrick Stolee <dstolee@microsoft.com> writes:
>
>> If core.commitGraph is true, verify the contents of the commit-graph
>> during 'git fsck' using the 'git commit-graph verify' subcommand. Run
>> this check on all alternates, as well.
> All right, so we have one config variable to control the use of
> serialized commit-graph feaature.  Nice.
>
>> We use a new process for two reasons:
>>
>> 1. The subcommand decouples the details of loading and verifying a
>>     commit-graph file from the other fsck details.
> All right, I can agree with that.
>
> On the other hand using subcommand makes debugging harder, though not in
> this case (well separated functionality that can be easily called with a
> standalone command to be debugged).
>
>> 2. The commit-graph verification requires the commits to be loaded
>>     in a specific order to guarantee we parse from the commit-graph
>>     file for some objects and from the object database for others.
> I don't quite understand this.  Could you explain it in more detail?

We use `lookup_commit()` when verifying the commit-graph. If these commits were loaded earlier in the process and parsed directly from the object database, then we aren't comparing the commit-graph file contents against the ODB.

Show 107 quoted lines
>
>> Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
>> ---
>>   Documentation/git-fsck.txt |  3 +++
>>   builtin/fsck.c             | 21 +++++++++++++++++++++
>>   t/t5318-commit-graph.sh    |  8 ++++++++
>>   3 files changed, 32 insertions(+)
>>
>> diff --git a/Documentation/git-fsck.txt b/Documentation/git-fsck.txt
>> index b9f060e3b2..ab9a93fb9b 100644
>> --- a/Documentation/git-fsck.txt
>> +++ b/Documentation/git-fsck.txt
>> @@ -110,6 +110,9 @@ Any corrupt objects you will have to find in backups or other archives
>>   (i.e., you can just remove them and do an 'rsync' with some other site in
>>   the hopes that somebody else has the object you have corrupted).
>>   
>> +If core.commitGraph is true, the commit-graph file will also be inspected
> Shouldn't we use `core.commitGraph` here?
>
>> +using 'git commit-graph verify'. See linkgit:git-commit-graph[1].
>> +
>>   Extracted Diagnostics
>>   ---------------------
>>   
>> diff --git a/builtin/fsck.c b/builtin/fsck.c
>> index ef78c6c00c..a6d5045b77 100644
>> --- a/builtin/fsck.c
>> +++ b/builtin/fsck.c
>> @@ -16,6 +16,7 @@
>>   #include "streaming.h"
>>   #include "decorate.h"
>>   #include "packfile.h"
>> +#include "run-command.h"
>>   
>>   #define REACHABLE 0x0001
>>   #define SEEN      0x0002
>> @@ -45,6 +46,7 @@ static int name_objects;
>>   #define ERROR_REACHABLE 02
>>   #define ERROR_PACK 04
>>   #define ERROR_REFS 010
>> +#define ERROR_COMMIT_GRAPH 020
> Minor nitpick and a sidenote: I wonder if it wouldn't be better to
> either use hexadecimal constants, or use (1 << n) for all ERROR_*
> preprocesor constants.
>
>>   
>>   static const char *describe_object(struct object *obj)
>>   {
>> @@ -815,5 +817,24 @@ int cmd_fsck(int argc, const char **argv, const char *prefix)
>>   	}
>>   
>>   	check_connectivity();
>> +
>> +	if (core_commit_graph) {
>> +		struct child_process commit_graph_verify = CHILD_PROCESS_INIT;
>> +		const char *verify_argv[] = { "commit-graph", "verify", NULL, NULL, NULL, NULL };
> I see that NULL at index 2 and 3 (at 3rd and 4th place) are here for
> "--object-dir" and <alternates-object-dir-path>, the last one is
> terminator for that case, but what is next to last NULL (at 5th place)
> for?
>
>> +		commit_graph_verify.argv = verify_argv;
>> +		commit_graph_verify.git_cmd = 1;
>> +
>> +		if (run_command(&commit_graph_verify))
>> +			errors_found |= ERROR_COMMIT_GRAPH;
>> +
>> +		prepare_alt_odb();
>> +		for (alt = alt_odb_list; alt; alt = alt->next) {
>> +			verify_argv[2] = "--object-dir";
>> +			verify_argv[3] = alt->path;
>> +			if (run_command(&commit_graph_verify))
>> +				errors_found |= ERROR_COMMIT_GRAPH;
>> +		}
>> +	}
> For performance reasons it may be better to start those 'git
> commit-graph verify' commands asynchronously earlier, so that they can
> run in parallel / concurrently wth other checks, and wait for them and
> get their error code at the end of git-fsck run.
>
> But that is probably better left for a separate commit.
>
>> +
>>   	return errors_found;
>>   }
>> diff --git a/t/t5318-commit-graph.sh b/t/t5318-commit-graph.sh
>> index 2680a2ebff..4941937163 100755
>> --- a/t/t5318-commit-graph.sh
>> +++ b/t/t5318-commit-graph.sh
>> @@ -394,4 +394,12 @@ test_expect_success 'detect invalid checksum hash' '
>>   		"incorrect checksum"
>>   '
>>   
>> +test_expect_success 'git fsck (checks commit-graph)' '
>> +	cd "$TRASH_DIRECTORY/full" &&
>> +	git fsck &&
>> +	corrupt_graph_and_verify $GRAPH_BYTE_FOOTER "\00" \
>> +		"incorrect checksum" &&
>> +	test_must_fail git fsck
>> +'
> All right; though the same caveats apply as with previous commit in
> series.  Perhaps it would be better to truncate commit-graph file, or
> corrupt it in some 'random' place.
>
>> +
>>   test_done
> Best,
Previous: Jakub NarebskiNext: Derrick Stolee
Message 135 of 149 in “Integrate commit-graph into 'fsck' and 'gc'”
  1. 00/12 Integrate commit-graph into 'fsck' and 'gc'Derrick Stolee, Apr 17, 2018
  2. 01/12 fixup! commit-graph: always load commit-graph informationDerrick Stolee, Apr 17, 2018
  3. 04/12 commit-graph: parse commit from chosen graphDerrick Stolee, Apr 17, 2018
  4. Jakub NarebskiApr 19, 2018
  5. 06/12 commit: force commit to parse from object databaseDerrick Stolee, Apr 17, 2018
  6. Jakub NarebskiApr 20, 2018
  7. 07/12 commit-graph: load a root tree from specific graphDerrick Stolee, Apr 17, 2018
  8. Jakub NarebskiApr 20, 2018
  9. 10/12 commit-graph: add '--reachable' optionDerrick Stolee, Apr 17, 2018
  10. Jakub NarebskiApr 20, 2018
  11. 12/12 commit-graph: update design documentDerrick Stolee, Apr 17, 2018
  12. Jakub NarebskiApr 20, 2018
  13. 11/12 gc: automatically write commit-graph filesDerrick Stolee, Apr 17, 2018
  14. Jakub NarebskiApr 20, 2018
  15. Ævar Arnfjörð BjarmasonApr 20, 2018
  16. 09/12 fsck: check commit-graphDerrick Stolee, Apr 17, 2018
  17. Jakub NarebskiApr 20, 2018
  18. 08/12 commit-graph: verify commit contents against odbDerrick Stolee, Apr 17, 2018
  19. Jakub NarebskiApr 20, 2018
  20. 02/12 commit-graph: add 'check' subcommandDerrick Stolee, Apr 17, 2018
  21. Jakub NarebskiApr 19, 2018
  22. 03/12 commit-graph: check file header informationDerrick Stolee, Apr 17, 2018
  23. Jakub NarebskiApr 19, 2018
  24. 05/12 commit-graph: check fanout and lookup tableDerrick Stolee, Apr 17, 2018
  25. Jakub NarebskiApr 20, 2018
  26. Derrick StoleeApr 17, 2018
  27. 00/12 Integrate commit-graph into fsck, gc, and fetchDerrick Stolee, May 10, 2018
  28. 01/12 commit-graph: add 'verify' subcommandDerrick Stolee, May 10, 2018
  29. Martin ÅgrenMay 10, 2018
  30. 02/12 commit-graph: verify file header informationDerrick Stolee, May 10, 2018
  31. Martin ÅgrenMay 10, 2018
  32. 04/12 commit-graph: verify fanout and lookup tableDerrick Stolee, May 10, 2018
  33. Martin ÅgrenMay 10, 2018
  34. Derrick StoleeMay 11, 2018
  35. 06/12 commit-graph: load a root tree from specific graphDerrick Stolee, May 10, 2018
  36. 08/12 fsck: verify commit-graphDerrick Stolee, May 10, 2018
  37. 12/12 commit-graph: update design documentDerrick Stolee, May 10, 2018
  38. 11/12 fetch: compute commit-graph by defaultDerrick Stolee, May 10, 2018
  39. 07/12 commit-graph: verify commit contents against odbDerrick Stolee, May 10, 2018
  40. 09/12 commit-graph: add '--reachable' optionDerrick Stolee, May 10, 2018
  41. 10/12 gc: automatically write commit-graph filesDerrick Stolee, May 10, 2018
  42. 05/12 commit: force commit to parse from object databaseDerrick Stolee, May 10, 2018
  43. 03/12 commit-graph: parse commit from chosen graphDerrick Stolee, May 10, 2018
  44. Martin ÅgrenMay 10, 2018
  45. Stefan BellerMay 10, 2018
  46. Derrick StoleeMay 11, 2018
  47. Martin ÅgrenMay 11, 2018
  48. Ævar Arnfjörð BjarmasonMay 10, 2018
  49. Derrick StoleeMay 11, 2018
  50. 00/12 Integrate commit-graph into fsck and gcDerrick Stolee, May 11, 2018
  51. 02/12 commit-graph: verify file header informationDerrick Stolee, May 11, 2018
  52. Martin ÅgrenMay 12, 2018
  53. Derrick StoleeMay 14, 2018
  54. Jakub NarebskiMay 20, 2018
  55. 01/12 commit-graph: add 'verify' subcommandDerrick Stolee, May 11, 2018
  56. Martin ÅgrenMay 12, 2018
  57. Derrick StoleeMay 14, 2018
  58. Jakub NarebskiMay 20, 2018
  59. 03/12 commit-graph: test that 'verify' finds corruptionDerrick Stolee, May 11, 2018
  60. Martin ÅgrenMay 12, 2018
  61. Jakub NarebskiMay 21, 2018
  62. Derrick StoleeMay 24, 2018
  63. 04/12 commit-graph: parse commit from chosen graphDerrick Stolee, May 11, 2018
  64. Martin ÅgrenMay 12, 2018
  65. 05/12 commit-graph: verify fanout and lookup tableDerrick Stolee, May 11, 2018
  66. 06/12 commit: force commit to parse from object databaseDerrick Stolee, May 11, 2018
  67. Martin ÅgrenMay 12, 2018
  68. 09/12 fsck: verify commit-graphDerrick Stolee, May 11, 2018
  69. Martin ÅgrenMay 17, 2018
  70. 11/12 gc: automatically write commit-graph filesDerrick Stolee, May 11, 2018
  71. Martin ÅgrenMay 17, 2018
  72. 12/12 commit-graph: update design documentDerrick Stolee, May 11, 2018
  73. 07/12 commit-graph: load a root tree from specific graphDerrick Stolee, May 11, 2018
  74. Martin ÅgrenMay 12, 2018
  75. 08/12 commit-graph: verify commit contents against odbDerrick Stolee, May 11, 2018
  76. Martin ÅgrenMay 12, 2018
  77. Derrick StoleeMay 14, 2018
  78. Martin ÅgrenMay 15, 2018
  79. 10/12 commit-graph: add '--reachable' optionDerrick Stolee, May 11, 2018
  80. Martin ÅgrenMay 17, 2018
  81. 00/20 Integrate commit-graph into 'fsck' and 'gc'Derrick Stolee, May 24, 2018
  82. 01/20 commit-graph: UNLEAK before die()Derrick Stolee, May 24, 2018
  83. Stefan BellerMay 24, 2018
  84. Derrick StoleeMay 25, 2018
  85. 04/20 commit: force commit to parse from object databaseDerrick Stolee, May 24, 2018
  86. Jakub NarebskiMay 27, 2018
  87. 03/20 commit-graph: parse commit from chosen graphDerrick Stolee, May 24, 2018
  88. Jakub NarebskiMay 27, 2018
  89. Derrick StoleeMay 29, 2018
  90. 06/20 commit-graph: add 'verify' subcommandDerrick Stolee, May 24, 2018
  91. Jakub NarebskiMay 27, 2018
  92. Derrick StoleeMay 30, 2018
  93. Jakub NarebskiJun 2, 2018
  94. Derrick StoleeJun 4, 2018
  95. 07/20 commit-graph: verify catches corrupt signatureDerrick Stolee, May 24, 2018
  96. Jakub NarebskiMay 28, 2018
  97. Derrick StoleeMay 29, 2018
  98. Jakub NarebskiJun 2, 2018
  99. 05/20 commit-graph: load a root tree from specific graphDerrick Stolee, May 24, 2018
  100. Jakub NarebskiMay 27, 2018
  101. 08/20 commit-graph: verify required chunks are presentDerrick Stolee, May 24, 2018
  102. Jakub NarebskiMay 28, 2018
  103. 02/20 commit-graph: fix GRAPH_MIN_SIZEDerrick Stolee, May 24, 2018
  104. Jakub NarebskiMay 26, 2018
  105. brian m. carlsonMay 26, 2018
  106. Jakub NarebskiJun 2, 2018
  107. 09/20 commit-graph: verify corrupt OID fanout and lookupDerrick Stolee, May 24, 2018
  108. Jakub NarebskiMay 30, 2018
  109. Derrick StoleeMay 30, 2018
  110. Duy NguyenJun 2, 2018
  111. Derrick StoleeJun 4, 2018
  112. Duy NguyenJun 4, 2018
  113. 10/20 commit-graph: verify objects existDerrick Stolee, May 24, 2018
  114. Jakub NarebskiMay 30, 2018
  115. Derrick StoleeMay 31, 2018
  116. 11/20 commit-graph: verify root tree OIDsDerrick Stolee, May 24, 2018
  117. Jakub NarebskiMay 30, 2018
  118. Derrick StoleeMay 31, 2018
  119. Jakub NarebskiJun 2, 2018
  120. 12/20 commit-graph: verify parent listDerrick Stolee, May 24, 2018
  121. Jakub NarebskiJun 1, 2018
  122. 14/20 commit-graph: verify commit dateDerrick Stolee, May 24, 2018
  123. Jakub NarebskiJun 2, 2018
  124. 16/20 commit-graph: verify contents match checksumDerrick Stolee, May 24, 2018
  125. SZEDER GáborMay 30, 2018
  126. Jakub NarebskiJun 2, 2018
  127. Derrick StoleeJun 4, 2018
  128. 19/20 gc: automatically write commit-graph filesDerrick Stolee, May 24, 2018
  129. Jakub NarebskiJun 2, 2018
  130. Derrick StoleeJun 4, 2018
  131. 20/20 commit-graph: update design documentDerrick Stolee, May 24, 2018
  132. Jakub NarebskiJun 2, 2018
  133. 17/20 fsck: verify commit-graphDerrick Stolee, May 24, 2018
  134. Jakub NarebskiJun 2, 2018
  135. Derrick StoleeJun 4, 2018
  136. 15/20 commit-graph: test for corrupted octopus edgeDerrick Stolee, May 24, 2018
  137. Jakub NarebskiJun 2, 2018
  138. Derrick StoleeJun 4, 2018
  139. 18/20 commit-graph: add '--reachable' optionDerrick Stolee, May 24, 2018
  140. Jakub NarebskiJun 2, 2018
  141. Derrick StoleeJun 4, 2018
  142. 13/20 commit-graph: verify generation numberDerrick Stolee, May 24, 2018
  143. Jakub NarebskiJun 2, 2018
  144. Derrick StoleeJun 4, 2018
  145. Ævar Arnfjörð BjarmasonMay 24, 2018
  146. Junio C HamanoMay 25, 2018
  147. Junio C HamanoMay 29, 2018
  148. Derrick StoleeMay 29, 2018
  149. Junio C HamanoMay 29, 2018

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