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[PATCH 0/1] revision: fix reachable objects being gc'ed in no blob clone repo

From
Han Young <hanyang.tony@bytedance.com>
Date
Aug 2, 2024, 07:31 UTC
Message-ID
<20240802073143.56731-1-hanyang.tony@bytedance.com>

We use --filter=blob:none to clone our large monorepo. After a while we started getting reports from engineers complaining that their local repository was broken. Upon further investigation, we found that broken repositories are missing objects that created in that particular local repository. git fsck reports "bad object: xxx".

Here are the minimal steps to recreate issue.
    # create a normal git repo, add one file and push to remote
    $ mkdir full && cd full && git init && touch foo
    $ git add foo && git commit -m "commit 1" && git push
    # partial clone a copy of the repo we just created
    $ cd ..
    $ git clone git@example.org:example/foo.git --filter=blob:none partial
    # create a commit in partial cloned repo and push it to remote
    $ cd partial && echo 'hello' > foo && git commit -a -m "commit 2"
    $ git push
    # run gc in partial repo
    $ git gc --prune=now
    # in normal git repo, create another commit on top of the
    # commit we created in partial repo
    $ cd ../full && git pull && echo ' world' >> foo
    $ git commit -a -m "commit 3" && git push
    # pull from remote in partial repo, and run gc again
    $ cd ../partial && git pull && git gc --prune=now
The last `git gc` will error out on fsck with error message like this:
  error: Could not read d3fbfea9e448461c2b72a79a95a220ae10defd94
  error: Could not read d3fbfea9e448461c2b72a79a95a220ae10defd94

Note that disabling commit graph on the partial repo will cause `git gc` to exit normally, but will still not solve the underlying problem. And in more complex situations, disabling commit graph will not avoid the error.

The problem is caused by the wrong result returned by setup_revision with `--exclude-promisor-objects` enabled. `git gc` will call `git repack`, which will call `git pack-objects` twice on a partially cloned repo. The first call to pack-objects combines all the promisor packfiles, and the second pack-objects command packs all reachable non-promisor objects into a normal packfile. However, a bug in setup_revision caused some non-promisor objects to be mistakenly marked as in promisor packfiles in the second call to pack-objects. These incorrectly marked objects are never repacked, and were deleted from the object store as a result. In revision.c, `process_parents()` recursively marks commit parents as UNINTERESTING if the commit itself is UNINTERESTING. `--exclude-promisor-objects` is implemented as "iterate all objects in promisor packfiles, mark them as UNINTERESTING". So when we find a commit object in a promisor packfile, we also set its ancestors as UNINTERESTING, whether the ancestor is a promisor object or not. In the example above, "commit 2" is a normal commit object, living in a normal packfile, but marked as a promisor object and gc'ed from the object store.

Han Young (1):
  revision: don't set parents as uninteresting if exclude promisor
 revision.c               |  2 +-
 t/t0410-partial-clone.sh | 22 +++++++++++++++++++++-
 2 files changed, 22 insertions(+), 2 deletions(-)
-- 
2.46.0.rc0.107.gae139121ac.dirty
Next: Han Young
Message 1 of 65 in “revision: fix reachable objects being gc'ed in no blob clone repo”
  1. 0/1 revision: fix reachable objects being gc'ed in no blob clone repoHan Young, Aug 2, 2024
  2. 1/1 revision: don't set parents as uninteresting if exclude promisor objectsHan Young, Aug 2, 2024
  3. Junio C HamanoAug 2, 2024
  4. 韩仰Aug 12, 2024
  5. Junio C HamanoAug 12, 2024
  6. 韩仰Aug 22, 2024
  7. Jonathan TanAug 13, 2024
  8. Jonathan TanAug 13, 2024
  9. Junio C HamanoAug 14, 2024
  10. Jonathan TanAug 14, 2024
  11. 0/4 revision: fix reachable objects being gc'ed in no blob clone repoHan Young, Aug 23, 2024
  12. 1/4 packfile: split promisor objects oidset into twoHan Young, Aug 23, 2024
  13. 2/4 revision: add exclude-promisor-pack-objects optionHan Young, Aug 23, 2024
  14. 3/4 revision: don't mark commit as UNINTERESTING if --exclude-promisor-objects is setHan Young, Aug 23, 2024
  15. 4/4 repack: use new exclude promisor pack objects optionHan Young, Aug 23, 2024
  16. 0/2 revision: fix reachable commits being gc'ed in partial repoCalvin Wan, Sep 19, 2024
  17. 1/2 packfile: split promisor objects oidset into twoCalvin Wan, Sep 19, 2024
  18. Junio C HamanoSep 22, 2024
  19. 2/2 fetch-pack.c: do not declare local commits as "have" in partial reposCalvin Wan, Sep 19, 2024
  20. Junio C HamanoSep 22, 2024
  21. Junio C HamanoSep 22, 2024
  22. 韩仰Sep 23, 2024
  23. Junio C HamanoSep 23, 2024
  24. Calvin WanOct 2, 2024
  25. 0/2 repack: pack everything into promisor packfile in partial reposHan Young, Sep 25, 2024
  26. 1/2 repack: pack everything into packfileHan Young, Sep 25, 2024
  27. 2/2 t0410: adapt tests to repack changesHan Young, Sep 25, 2024
  28. Phillip WoodSep 25, 2024
  29. Junio C HamanoSep 25, 2024
  30. Junio C HamanoSep 25, 2024
  31. Missing Promisor Objects in Partial Repo Design DocCalvin Wan, Oct 1, 2024
  32. Junio C HamanoOct 1, 2024
  33. Junio C HamanoOct 2, 2024
  34. Han YoungOct 2, 2024
  35. Calvin WanOct 8, 2024
  36. Han YoungOct 9, 2024
  37. Jonathan TanOct 9, 2024
  38. Jonathan TanOct 12, 2024
  39. Han YoungOct 12, 2024
  40. Jonathan TanOct 14, 2024
  41. Jonathan TanOct 9, 2024
  42. 0/3 repack: pack everything into promisor packfile in partial reposHan Young, Oct 8, 2024
  43. 1/3 repack: pack everything into packfileHan Young, Oct 8, 2024
  44. Calvin WanOct 8, 2024
  45. 2/3 t0410: adapt tests to repack changesHan Young, Oct 8, 2024
  46. 3/3 partial-clone: update docHan Young, Oct 8, 2024
  47. Junio C HamanoOct 8, 2024
  48. Junio C HamanoOct 8, 2024
  49. Han YoungOct 9, 2024
  50. 0/3 repack: pack everything into promisor packfile in partial reposHan Young, Oct 11, 2024
  51. 1/3 repack: pack everything into packfileHan Young, Oct 11, 2024
  52. 2/3 repack: adapt tests to repack changesHan Young, Oct 11, 2024
  53. 3/3 partial-clone: update docHan Young, Oct 11, 2024
  54. Junio C HamanoOct 11, 2024
  55. Junio C HamanoOct 11, 2024
  56. 0/3 repack: pack everything into promisor packfile in partial reposHan Young, Oct 14, 2024
  57. 1/3 repack: pack everything into packfileHan Young, Oct 14, 2024
  58. 2/3 t0410: adapt tests to repack changesHan Young, Oct 14, 2024
  59. 3/3 partial-clone: update docHan Young, Oct 14, 2024
  60. 0/3 Repack on fetchJonathan Tan, Oct 21, 2024
  61. 1/3 move variableJonathan Tan, Oct 21, 2024
  62. 2/3 pack-objectsJonathan Tan, Oct 21, 2024
  63. 3/3 record local links and call pack-objectsJonathan Tan, Oct 21, 2024
  64. Han YoungOct 23, 2024
  65. Jonathan TanOct 23, 2024

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