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Re: 2.18.0 Regression: packing performance and effectiveness

From
Jeff King <peff@peff.net>
Date
Jul 19, 2018, 19:17 UTC
Message-ID
<20180719191719.GA22504@sigill.intra.peff.net>
In-Reply-To
<20180719182442.GA5796@duynguyen.home>
On Thu, Jul 19, 2018 at 08:24:42PM +0200, Duy Nguyen wrote:
Show 10 quoted lines
> > > Looking at that output, my _guess_ is that we somehow end up with a
> > > bogus delta_size value and write out a truncated entry. But I couldn't
> > > reproduce the issue with smaller test cases.
> > 
> > Could it be a race condition?
> 
> I'm convinced my code is racy (between two writes). I created a broken
> pack once with 32 threads. Elijah please try again with this new
> patch. It should fix this (I only tried repack a few times so far but
> will continue)

Good thinking, it's definitely racy. And that's why my tiny reproduction didn't work. I even tried bumping it up to 10 blobs instead of 2, but that's not nearly enough.

Show 13 quoted lines
> The race is this
> 
> 1. Thread one sees a large delta size and NULL delta_size[] array,
>    allocates the new array and in the middle of copying old delta
>    sizes over.
> 
> 2. Thread two wants to write a new (large) delta size. It sees that
>    delta_size[] is already allocated, it writes the correct size there
>    (and truncated one in object_entry->delta_size_)
> 
> 3. Back to thread one, it now copies the truncated value in
>    delta_size_ from step 2 to delta_size[] array, overwriting the good
>    value that thread two wrote.

Right. Or we could even allocate two delta_size arrays, since the NULL-check and the allocation are not atomic.

> There is also a potential read/write race where a read from
> pack_size[] happens when the array is not ready. But I don't think it
> can happen with current try_delta() code. I protect it anyway to be
> safe.

Hrm. That one's disappointing, because we read much more often than we write, and this introduces potential lock contention. It may not matter much in practice, though.

Show 13 quoted lines
> +static unsigned long oe_delta_size(struct packing_data *pack,
> +				   const struct object_entry *e)
> +{
> +	unsigned long size;
> +
> +	read_lock();	 /* to protect access to pack->delta_size[] */
> +	if (pack->delta_size)
> +		size = pack->delta_size[e - pack->objects];
> +	else
> +		size = e->delta_size_;
> +	read_unlock();
> +	return size;
> +}

Yuck, we even have to pay the read_lock() cost when we don't overflow into the pack->delta_size array (but I agree we have to for correctness).

Again, though, this amount of contention probably doesn't make a big difference, since we're holding the lock for such a short time (especially compared to all the work of computing the deltas).

This could be separate from the read_lock(), though, since that one does block for much longer (e.g., while zlib inflating objects from disk).

Show 10 quoted lines
> +static void oe_set_delta_size(struct packing_data *pack,
> +			      struct object_entry *e,
> +			      unsigned long size)
> +{
> +	read_lock();	 /* to protect access to pack->delta_size[] */
> +	if (!pack->delta_size && size < pack->oe_delta_size_limit) {
> +		e->delta_size_ = size;
> +		read_unlock();
> +		return;
> +	}

And ditto for this one. I thought we could get away with the "fast case" skipping the lock, but we have to check pack->delta_size atomically to even use it.

If each individual delta_size had an overflow bit that indicates "use me literally" or "look me up in the array", then I think the "quick" ones could avoid locking. It may not be worth the complexity though.

Show 8 quoted lines
> @@ -160,6 +162,8 @@ struct object_entry *packlist_alloc(struct packing_data *pdata,
>  
>  		if (!pdata->in_pack_by_idx)
>  			REALLOC_ARRAY(pdata->in_pack, pdata->nr_alloc);
> +		if (pdata->delta_size)
> +			REALLOC_ARRAY(pdata->delta_size, pdata->nr_alloc);
>  	}
>  

This realloc needs to happen under the lock, too, I think. It would be OK without locking for an in-place realloc, but if the chunk has to be moved, somebody in oe_set_delta_size() might write to the old memory.

This is in a file that doesn't even know about read_lock(), of course. Probably you need a delta mutex as part of the "struct packing_data", and then it can just be handled inside pack-objects.c entirely.

-Peff
Previous: Duy NguyenNext: Elijah Newren
Message 15 of 44 in “2.18.0 Regression: packing performance and effectiveness”
  1. Elijah NewrenJul 18, 2018
  2. fix-v1: revert "pack-objects: shrink delta_size field in struct object_entry"Elijah Newren, Jul 18, 2018
  3. fix-v2: make OE_DELTA_SIZE_BITS a bit biggerElijah Newren, Jul 18, 2018
  4. Duy NguyenJul 19, 2018
  5. Jeff KingJul 19, 2018
  6. Elijah NewrenJul 19, 2018
  7. Duy NguyenJul 19, 2018
  8. Jeff KingJul 19, 2018
  9. Duy NguyenJul 19, 2018
  10. Duy NguyenJul 19, 2018
  11. Elijah NewrenJul 19, 2018
  12. Jeff KingJul 19, 2018
  13. Duy NguyenJul 19, 2018
  14. Duy NguyenJul 19, 2018
  15. Jeff KingJul 19, 2018
  16. Elijah NewrenJul 19, 2018
  17. Jeff KingJul 20, 2018
  18. Jeff KingJul 20, 2018
  19. Duy NguyenJul 20, 2018
  20. Elijah NewrenJul 20, 2018
  21. Jeff KingJul 19, 2018
  22. Junio C HamanoJul 19, 2018
  23. Junio C HamanoJul 19, 2018
  24. pack-objects: fix performance issues on packing large deltasNguyễn Thái Ngọc Duy, Jul 20, 2018
  25. Jeff KingJul 20, 2018
  26. Duy NguyenJul 21, 2018
  27. Jeff KingJul 23, 2018
  28. Elijah NewrenJul 20, 2018
  29. Elijah NewrenJul 20, 2018
  30. Duy NguyenJul 21, 2018
  31. Duy NguyenJul 21, 2018
  32. Duy NguyenJul 21, 2018
  33. Elijah NewrenJul 21, 2018
  34. Duy NguyenJul 21, 2018
  35. Elijah NewrenJul 22, 2018
  36. Duy NguyenJul 22, 2018
  37. Elijah NewrenJul 23, 2018
  38. Duy NguyenJul 23, 2018
  39. pack-objects: fix performance issues on packing large deltasNguyễn Thái Ngọc Duy, Jul 22, 2018
  40. Junio C HamanoJul 23, 2018
  41. Duy NguyenJul 23, 2018
  42. Duy NguyenJul 23, 2018
  43. Jeff KingJul 23, 2018
  44. Johannes SixtJul 26, 2018

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