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Re: Excessive mmap [was Git server eats all memory]

From
Avery Pennarun <apenwarr@gmail.com>
Date
Aug 9, 2010, 16:50 UTC
Message-ID
<AANLkTiktriuvciNTNPD4941AG3th6rWwUYT4v_UnaAz3@mail.gmail.com>
In-Reply-To
<westyn3n3sa.fsf@kanis.fr>

On Mon, Aug 9, 2010 at 12:34 PM, Ivan Kanis <expire-by-2010-08-14@kanis.fr> wrote:

Show 9 quoted lines
> Dmitry Potapov <dpotapov@gmail.com> wrote:
>> On 64-bit architecture, you have plenty virtual space, and mapping
>> a file to memory should not take much physical memory (only space
>> needed for system tables).
>
> What I can tell from the mmap man page is that it should map memory to a
> file. I assume it shouldn't take up physical memory. However I am seeing
> physical memory being consumed. It might be a feature of the kernel. Is
> there a way to turn it off?

'ps axu' will show two columns: VSIZE and RSS. The only one that actually matters is RSS.

When you mmap a file, it will immediately consume a lot of VSIZE - but this won't affect your available system memory, because you have only consumed "virtual" memory. Instead of swapping that memory out to the swap file, the kernel knows that this chunk of virtual memory is already on disk - inside the mmap'd file.

When you access some of the pages of the mmap'd file, the kernel will swap those pages into memory, which increases RSS. This uses *real* memory on the system.

As git generates a new pack file, it needs to access every single page of every single pack that it's reading from, so eventually, all the stuff you need will get sucked into RSS, so you'll see that number grow and grow. If your packfiles are huge, this is a lot of memory.

Now, the kernel is supposed to be smart enough to release old pages out of RSS if you stop using them; it's no different from what the kernel does with any cached file data. So it shouldn't be expensive to mmap instead of just reading the file.

Show 12 quoted lines
> Looking some more into it today the bulk of the memory allocation
> happens in write_pack_file in the following loop.
>
> for (; i < nr_objects; i++) {
>    if (!write_one(f, objects + i, &offset))
>        break;
>    display_progress(progress_state, written);
> }
>
> This eventually calls write_object, here I am wondering if the
> unuse_pack function is doing its job. As far as I can tell it writes a
> null in memory, that I think is not enough to reclaim memory.

What do you mean by the "memory allocation" happens here? How are you measuring it?

unuse_pack indeed doesn't free any memory; it just zeroes a pointer and decreases a refcount. I don't know much about this code, but I assume something else goes and cleans up the mmaps later.

In any case, mmap/munmap have little to do with your "real" memory usage. munmap() won't free any actual kernel memory; the used pages will still be floating around in disk cache.

Show 5 quoted lines
> I also looked at the use_pack function where the mmap is
> happening. Would it be worth refactoring this function so that it uses
> an index withing a file instead of mmap?
>
> Unless I hear of a better idea I'll be trying that tomorrow...
I wouldn't expect this to help, but I would be interested to hear if it does.

If the problem is simply that you're flooding the kernel disk cache with data you'll use only once, to the detriment of everything else on the system, then one thing that might help could be posix_fadvise:

    posix_fadvise(fd, ofs, len, POSIX_FADV_DONTNEED);

bup uses this when backing up huge files, since it knows it's only going to use each block once, and this seemed to decrease system load (without affecting bup's own performance) in some test cases. However, it uses this for filesystem files, not packs, so it's a different use case.

On the other hand, perhaps a more important question is: why does git feel like it needs to generate entirely new packs for each person doing a clone on your system? Shouldn't it be reusing existing ones and just streaming them straight out to the recipient?

Have fun,
Avery
Previous: Ivan KanisNext: Tomas Carnecky
Message 15 of 28 in “Git server eats all memory”
  1. Ivan KanisAug 4, 2010
  2. Matthieu MoyAug 4, 2010
  3. Ivan KanisAug 4, 2010
  4. Avery PennarunAug 4, 2010
  5. Ivan KanisAug 5, 2010
  6. Jared HanceAug 5, 2010
  7. Nguyen Thai Ngoc DuyAug 6, 2010
  8. Nguyen Thai Ngoc DuyAug 6, 2010
  9. Jakub NarebskiAug 6, 2010
  10. Ivan KanisAug 6, 2010
  11. Dmitry PotapovAug 7, 2010
  12. Excessive mmap [was Git server eats all memory]Ivan Kanis, Aug 9, 2010
  13. Dmitry PotapovAug 9, 2010
  14. Ivan KanisAug 9, 2010
  15. Avery PennarunAug 9, 2010
  16. Tomas CarneckyAug 9, 2010
  17. Avery PennarunAug 9, 2010
  18. Dmitry PotapovAug 9, 2010
  19. Ivan KanisAug 11, 2010
  20. Avery PennarunAug 11, 2010
  21. Duy NguyenJun 20, 2018
  22. Robin H. JohnsonAug 10, 2010
  23. Sverre RabbelierAug 10, 2010
  24. Sam VilainAug 11, 2010
  25. Ivan KanisAug 11, 2010
  26. Nguyen Thai Ngoc DuyAug 9, 2010
  27. Ivan KanisAug 9, 2010
  28. Dmitry PotapovAug 17, 2010

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