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Re: Error:non-monotonic index after failed recursive "sed" command

From
Johannes Sixt <j.sixt@viscovery.net>
Date
Jan 14, 2013, 12:21 UTC
Message-ID
<50F3F852.8060800@viscovery.net>
In-Reply-To
<CAMoGvRKkSZqcoGtiebu6tuPndzOjQ1=JgQHb+iusAHpUbA2HbA@mail.gmail.com>
Am 1/14/2013 12:40, schrieb George Karpenkov:
Show 35 quoted lines
> I've managed to corrupt my very valuable repository with a recursive
> sed which went wrong.
> I wanted to convert all tabs to spaces with the following command:
> 
> find ./ -name '*.*' -exec sed -i 's/\t/    /g' {} \;
> 
> I think that has changed not only the files in the repo, but the data
> files in .git directory itself. As a result, my index became
> corrupted, and almost every single command dies:
> 
>> git log
> error: non-monotonic index
> ..git/objects/pack/pack-314b1944adebea645526b6724b2044c1313241f5.idx
> error: non-monotonic index
> ..git/objects/pack/pack-75c95b0defe1968b61e4f4e1ab7040d35110bfdc.idx
> ....
> error: non-monotonic index
> ..git/objects/pack/pack-3da0da48d05140b55f4af1cf87c55a2d7898bdd5.idx
> fatal: bad object HEAD
> 
> Output for git fsck is even worse:
> 
>> git fsck
> error: non-monotonic index
> ..git/objects/pack/pack-434f8445672a92f123accffce651bdb693bd8fcb.idx
> ....
> error: non-monotonic index
> ..git/objects/pack/pack-0c9d5ae4e2b46dd78dace7533adf6cdfe10326ef.idx
> error: non-monotonic index
> ..git/objects/pack/pack-e8bd5c7f85e96e7e548a62954a8f7c7f223ba9e0.idx
> Segmentation fault (core dumped)
> 
> Any advice? I've lost about 2 weeks worth of work.
> Is there anything better I can try to do other then trying to
> reconstruct the data manually from git blobs?

First things first: MAKE A COPY OF THE CURRENT STATE of the repository, including the worktree, so that you have something to go back to if things get worse later. (At the very least, we want to debug the segfault that we see above.)

So far that's all I can say about your case. Everything that follows is just a shot in the dark, and others may have better ideas. Also, look here: https://github.com/gitster/git/blob/master/Documentation/howto/recover-corrupted-blob-object.txt

You can remove the *.idx files, because they do not carry essential information. Now try git fsck; git repack.

Try the reverse edit:
 find .git -name '*.*' -exec sed -i 's/    /\t/g' {} \;

Remove .git/index; it can be reconstructed (of course, assuming you started all this with a clean index; if not, you lose the staged changes).

-- Hannes
Previous: John KeepingNext: Junio C Hamano
Message 4 of 9 in “Error:non-monotonic index after failed recursive "sed" command”
  1. George KarpenkovJan 14, 2013
  2. Matthieu MoyJan 14, 2013
  3. John KeepingJan 14, 2013
  4. Johannes SixtJan 14, 2013
  5. Junio C HamanoJan 14, 2013
  6. Matthieu MoyJan 14, 2013
  7. George KarpenkovJan 14, 2013
  8. Philip OakleyJan 14, 2013
  9. George KarpenkovJan 15, 2013

Read the whole thread, see it on lore, or plain text.

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