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Re: [GSoC Patch 0/3] Move generation, graph_pos to a slab

From
SZEDER Gábor <szeder.dev@gmail.com>
Date
Jun 8, 2020, 16:46 UTC
Message-ID
<20200608164637.GE8232@szeder.dev>
In-Reply-To
<13db757a-9412-7f1e-805c-8a028c4ab2b1@gmail.com>
On Mon, Jun 08, 2020 at 09:45:12AM -0400, Derrick Stolee wrote:
Show 49 quoted lines
> On 6/8/2020 4:36 AM, SZEDER Gábor wrote:
> > On Mon, Jun 08, 2020 at 11:18:27AM +0530, Abhishek Kumar wrote:
> >> On Sun, Jun 07, 2020 at 09:53:47PM +0200, SZEDER Gábor wrote:
> >>> On Thu, Jun 04, 2020 at 10:22:27AM -0400, Derrick Stolee wrote:
> >>>> On 6/4/2020 3:27 AM, Abhishek Kumar wrote:
> >>>>> The struct commit is used in many contexts. However, members generation
> >>>>> and graph_pos are only used for commit-graph related operations and
> >>>>> otherwise waste memory.
> >>>>>
> >>>>> This wastage would have been more pronounced as transistion to
> >>>>> generation number v2, which uses 64-bit generation number instead of
> >>>>> current 32-bits.
> >>>>
> >>>> Thanks! This is an important step, and will already improve
> >>>> performance in subtle ways.
> >>>
> >>> While the reduced memory footprint of each commit object might improve
> >>> performance, accessing graph position and generation numbers in a
> >>> commit-slab is more expensive than direct field accesses in 'struct
> >>> commit' instances.  Consequently, these patches increase the runtime
> >>> of 'git merge-base --is-ancestor HEAD~50000 HEAD' in the linux
> >>> repository from 0.630s to 0.940s.
> >>>
> >>
> >> Thank you for checking performance. Performance penalty was something we
> >> had discussed here [1]. 
> >>
> >> Caching the commit slab results in local variables helped wonderfully in v2 [2].
> >> For example, the runtime of 'git merge-base --is-ancestor HEAD~50000 HEAD'
> >> in the linux repository increased from 0.762 to 0.767s. Since this is a
> >> change of <1%, it is *no longer* a performance regression in my opinion.
> > 
> > Interesting, I measured 0.870s with v2, still a notable increase from
> > 0.630s.
> 
> This is an interesting point. The --is-ancestor is critical to the
> performance issue (as measured on my machine).
> 
> For "git merge-base HEAD~50000 HEAD" on the Linux repo, I get
> 
> v2.27.0:
> real    0m0.515s
> user    0m0.467s
> sys     0m0.048s
> 
> v2 series:
> real    0m0.534s
> user    0m0.481s
> sys     0m0.053s
I, too, see similarly small differences in this case.
Show 34 quoted lines
> With "--is-ancestor" I see the following:
> 
> v2.27.0:
> real    0m0.591s
> user    0m0.539s
> sys     0m0.052s
> 
> v2 series:
> real    0m0.773s
> user    0m0.733s
> sys     0m0.040s
> 
> The --is-ancestor option [1] says
> 
>     Check if the first <commit> is an ancestor of the second
>     <commit>, and exit with status 0 if true, or with status
>     1 if not. Errors are signaled by a non-zero status that
>     is not 1.
> 
> [1] https://git-scm.com/docs/git-merge-base#Documentation/git-merge-base.txt---is-ancestor
> 
> This _should_ be faster than "git branch --contains HEAD~50000",
> but it is much much slower:
> 
> $ time git branch --contains HEAD~50000
> real    0m0.068s
> user    0m0.061s
> sys     0m0.008s
> 
> So, there is definitely something going on that slows the
> "--is-ancestor" path in this case. But, the solution is not
> to halt the current patch (which likely has memory footprint
> benefits when dealing with a lot of tree and blob objects)
> and instead fix the underlying algorithm.

Other, more common cases are affected as well, notably the simple 'git rev-list --topo-order':

  performance: 1.226479734 s: git command: /home/szeder/src/git/BUILDS/v2.27.0/bin/git rev-list --topo-order HEAD
  max RSS: 162400k
  
  performance: 1.741309536 s: git command: /home/szeder/src/git/git rev-list --topo-order HEAD
  max RSS: 169556k

Is the supposed memory footprint reduction that large to justify this runtime increase?

> Let's add that to the list of things to do.
And to the commit messages.
Show 26 quoted lines
> >>>  create mode 100644 contrib/coccinelle/generation.cocci
> >>>  create mode 100644 contrib/coccinelle/graph_pos.cocci
> >>
> >> I appreciate the Coccinelle scripts to help identify
> >> automatic fixes for other topics in-flight. However,
> >> I wonder if they would be better placed inside the
> >> existing commit.cocci file?
> >
> > We add Coccinelle scripts to avoid undesirable code patterns entering
> > our code base.  That, however, is not the case here: this is a
> > one-time conversion, and at the end of this series 'struct commit'
> > won't have a 'generation' field anymore, so once it's merged the
> > compiler will catch any new 'commit->generation' accesses.  Therefore
> > I don't think that these Coccinelle scripts should be added at all.
> 
> I disagree. We _also_ add Coccinelle scripts when doing one-time
> refactors to avoid logical merge conflicts with other topics in
> flight. If someone else is working on a parallel topic that adds
> references to graph_pos or generation member, then the scripts provide
> an easy way for the maintainer to update those references in the merge
> commit. Alternatively, the contributor could rebase on top of this
> series and run the scripts themselves to fix their patches before
> submission.
> 
> For example, this was done carefully in the sha->object_id
> conversion using contrib/coccinelle/object_id.cocci.

'object_id.cocci' is not about sha->object_id conversions, but about avoiding undesirable code patterns, e.g. we prefer oideq() over !oidcmp(), and the compiler, of course, can't help to catch that. Coccinelle scripts used for actual sha->object_id transformations were not added to 'object_id.cocci', but were recorded only in the commit messages for reference, see e.g. 9b56149996 (merge-recursive: convert struct merge_file_info to object_id, 2016-06-24) and a couple of its ancestors.

Previous: Derrick StoleeNext: Jakub Narębski
Message 18 of 39 in “Move generation, graph_pos to a slab”
  1. 0/3 Move generation, graph_pos to a slabAbhishek Kumar, Jun 4, 2020
  2. 1/3 commit: introduce helpers for generation slabAbhishek Kumar, Jun 4, 2020
  3. Derrick StoleeJun 4, 2020
  4. Junio C HamanoJun 4, 2020
  5. Jakub NarębskiJun 5, 2020
  6. 3/3 commit: convert commit->graph_pos to a slabAbhishek Kumar, Jun 4, 2020
  7. Jakub NarębskiJun 7, 2020
  8. 2/3 commit: convert commit->generation to a slabAbhishek Kumar, Jun 4, 2020
  9. Derrick StoleeJun 4, 2020
  10. Junio C HamanoJun 4, 2020
  11. Jakub NarębskiJun 6, 2020
  12. Derrick StoleeJun 4, 2020
  13. Junio C HamanoJun 4, 2020
  14. SZEDER GáborJun 7, 2020
  15. Abhishek KumarJun 8, 2020
  16. SZEDER GáborJun 8, 2020
  17. Derrick StoleeJun 8, 2020
  18. SZEDER GáborJun 8, 2020
  19. Jakub NarębskiJun 8, 2020
  20. Jakub NarębskiJun 5, 2020
  21. 0/4 Move generation, graph_pos to a slabAbhishek Kumar, Jun 7, 2020
  22. 1/4 commit-graph: introduce commit_graph_data_slabAbhishek Kumar, Jun 7, 2020
  23. Taylor BlauJun 15, 2020
  24. 2/4 commit: move members graph_pos, generation to a slabAbhishek Kumar, Jun 7, 2020
  25. SZEDER GáborJun 8, 2020
  26. Derrick StoleeJun 8, 2020
  27. 3/4 commit-graph: use generation directly when writing commit-graphAbhishek Kumar, Jun 7, 2020
  28. Jakub NarębskiJun 8, 2020
  29. Taylor BlauJun 15, 2020
  30. 4/4 commit-graph: minimize commit_graph_data_slab accessAbhishek Kumar, Jun 7, 2020
  31. Jakub NarębskiJun 8, 2020
  32. Taylor BlauJun 15, 2020
  33. 0/4 Move generation, graph_pos to a slabAbhishek Kumar, Jun 17, 2020
  34. 1/4 object: drop parsed_object_pool->commit_countAbhishek Kumar, Jun 17, 2020
  35. 2/4 commit-graph: introduce commit_graph_data_slabAbhishek Kumar, Jun 17, 2020
  36. 3/4 commit: move members graph_pos, generation to a slabAbhishek Kumar, Jun 17, 2020
  37. 4/4 commit-graph: minimize commit_graph_data_slab accessAbhishek Kumar, Jun 17, 2020
  38. Derrick StoleeJun 19, 2020
  39. Junio C HamanoJun 19, 2020

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