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[PATCH 02/34] commit-graph: fix parsing the Chunk Lookup table

From
SZEDER Gábor <szeder.dev@gmail.com>
Date
May 29, 2020, 08:50 UTC
Message-ID
<20200529085038.26008-3-szeder.dev@gmail.com>
In-Reply-To
<20200529085038.26008-1-szeder.dev@gmail.com>

The commit-graph file format specifies that the chunks may be in any order. However, if the OID Lookup chunk happens to be the last one in the file, then any command attempting to access the commit-graph data will fail with:

  fatal: invalid commit position. commit-graph is likely corrupt

In this case the error is wrong, the commit-graph file does conform to the specification, but the parsing of the Chunk Lookup table is a bit buggy, and leaves the field holding the number of commits in the commit-graph zero-initialized.

The number of commits in the commit-graph is determined while parsing the Chunk Lookup table, by dividing the size of the OID Lookup chunk with the hash size. However, the Chunk Lookup table doesn't actually store the size of the chunks, but it stores their starting offset. Consequently, the size of a chunk can only be calculated by subtracting the starting offsets of that chunk from the offset of the subsequent chunk, or in case of the last chunk from the offset recorded in the terminating label. This is currenly implemented in a bit complicated way: as we iterate over the entries of the Chunk Lookup table, we check the ID of each chunk and store its starting offset, then we check the ID of the last seen chunk and calculate its size using its previously saved offset if necessary (at the moment it's only necessary for the OID Lookup chunk). Alas, while parsing the Chunk Lookup table we only interate through the "real" chunks, but never look at the terminating label, thus don't even check whether it's necessary to calulate the size of the last chunk. Consequently, if the OID Lookup chunk is the last one, then we don't calculate its size and turn don't run the piece of code determining the number of commits in the commit graph, leaving the field holding that number unchanged (i.e. zero-initialized), eventually triggering the sanity check in load_oid_from_graph().

Fix this by iterating through all entries in the Chunk Lookup table, including the terminating label.

Note that this is the minimal fix, suitable for the maintenance track. A better fix would be to simplify how the chunk sizes are calculated, but that is a more invasive change, less suitable for 'maint', so that will be done in later patches.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
---
 commit-graph.c | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/commit-graph.c b/commit-graph.c
index b205e65ed1..12df74c925 100644
--- a/commit-graph.c
+++ b/commit-graph.c
@@ -222,7 +222,7 @@ struct commit_graph *parse_commit_graph(void *graph_map, int fd,
 	last_chunk_id = 0;
 	last_chunk_offset = 8;
 	chunk_lookup = data + 8;
-	for (i = 0; i < graph->num_chunks; i++) {
+	for (i = 0; i <= graph->num_chunks; i++) {
 		uint32_t chunk_id;
 		uint64_t chunk_offset;
 		int chunk_repeated = 0;
-- 
2.27.0.rc1.431.g5c813f95dc
Previous: SZEDER GáborNext: SZEDER Gábor
Message 3 of 43 in “An alternative modified path Bloom filters implementation”
  1. 00/34 An alternative modified path Bloom filters implementationSZEDER Gábor, May 29, 2020
  2. 01/34 tree-walk.c: don't match submodule entries for 'submod/anything'SZEDER Gábor, May 29, 2020
  3. 02/34 commit-graph: fix parsing the Chunk Lookup tableSZEDER Gábor, May 29, 2020
  4. 03/34 commit-graph-format.txt: all multi-byte numbers are in network byte orderSZEDER Gábor, May 29, 2020
  5. 04/34 commit-slab: add a function to deep free entries on the slabSZEDER Gábor, May 29, 2020
  6. Derrick StoleeJun 4, 2020
  7. SZEDER GáborJun 27, 2020
  8. Derrick StoleeJun 29, 2020
  9. 05/34 diff.h: drop diff_tree_oid() & friends' return valueSZEDER Gábor, May 29, 2020
  10. 07/34 commit-graph: simplify parse_commit_graph() #1SZEDER Gábor, May 29, 2020
  11. 06/34 commit-graph: clean up #includesSZEDER Gábor, May 29, 2020
  12. 09/34 commit-graph: simplify write_commit_graph_file() #1SZEDER Gábor, May 29, 2020
  13. 10/34 commit-graph: simplify write_commit_graph_file() #2SZEDER Gábor, May 29, 2020
  14. 08/34 commit-graph: simplify parse_commit_graph() #2SZEDER Gábor, May 29, 2020
  15. 11/34 commit-graph: allocate the 'struct chunk_info' array dinamicallySZEDER Gábor, May 29, 2020
  16. 12/34 commit-graph: unify the signatures of all write_graph_chunk_*() functionsSZEDER Gábor, May 29, 2020
  17. 13/34 commit-graph: simplify write_commit_graph_file() #3SZEDER Gábor, May 29, 2020
  18. 14/34 commit-graph: check chunk sizes after writingSZEDER Gábor, May 29, 2020
  19. 16/34 Add a generic and minimal Bloom filter implementationSZEDER Gábor, May 29, 2020
  20. 17/34 Import a streaming-capable Murmur3 hash function implementationSZEDER Gábor, May 29, 2020
  21. 15/34 commit-graph-format.txt: document the modified path Bloom filter chunksSZEDER Gábor, May 29, 2020
  22. SZEDER GáborJun 2, 2020
  23. 18/34 commit-graph: write "empty" Modified Path Bloom Filter Index chunkSZEDER Gábor, May 29, 2020
  24. 19/34 commit-graph: add commit slab for modified path Bloom filtersSZEDER Gábor, May 29, 2020
  25. 20/34 commit-graph: fill the Modified Path Bloom Filter Index chunkSZEDER Gábor, May 29, 2020
  26. 21/34 commit-graph: load and use the Modified Path Bloom Filter Index chunkSZEDER Gábor, May 29, 2020
  27. 27/34 commit-graph: load modified path Bloom filters for merge commitsSZEDER Gábor, May 29, 2020
  28. 28/34 commit-graph: write Modified Path Bloom Filter Merge Index chunkSZEDER Gábor, May 29, 2020
  29. 30/34 commit-graph: move write_commit_graph_reachable below write_commit_graphSZEDER Gábor, May 29, 2020
  30. 29/34 commit-graph: extract init and free write_commit_graph_contextSZEDER Gábor, May 29, 2020
  31. 31/34 t7007-show: make the first test compatible with the next patchSZEDER Gábor, May 29, 2020
  32. 26/34 commit-graph: deduplicate modified path Bloom filtersSZEDER Gábor, May 29, 2020
  33. 25/34 commit-graph: check embedded modified path Bloom filters with a maskSZEDER Gábor, May 29, 2020
  34. 24/34 commit-graph: check all leading directories in modified path Bloom filtersSZEDER Gábor, May 29, 2020
  35. 23/34 commit-graph: load and use the Modified Path Bloom Filters chunkSZEDER Gábor, May 29, 2020
  36. 22/34 commit-graph: write the Modified Path Bloom Filters chunkSZEDER Gábor, May 29, 2020
  37. 34/34 commit-graph: use modified path Bloom filters with wildcards, if possibleSZEDER Gábor, May 29, 2020
  38. 33/34 commit-graph: write modified path Bloom filters in "history order"SZEDER Gábor, May 29, 2020
  39. 32/34 PoC commit-graph: use revision walk machinery for '--reachable'SZEDER Gábor, May 29, 2020
  40. Derrick StoleeMay 29, 2020
  41. Johannes SchindelinMay 28, 2020
  42. Taylor BlauJun 1, 2020
  43. Junio C HamanoJun 2, 2020

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