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Re: [PATCH 00/32] Split index mode for very large indexes

From
Duy Nguyen <pclouds@gmail.com>
Date
May 9, 2014, 10:27 UTC
Message-ID
<20140509102744.GA4939@lanh>
In-Reply-To
<CAJo=hJtgijOOMPbFjvTUaENw=hr0YixYmy1UkdqEd=CpLZ5L2A@mail.gmail.com>
On Mon, Apr 28, 2014 at 02:18:44PM -0700, Shawn Pearce wrote:
Show 15 quoted lines
> > The read penalty is not addressed here, so I still pay 14MB hashing
> > cost. But that's an easy problem. We could cache the validated index
> > in a daemon. Whenever git needs to load an index, it pokes the daemon.
> > The daemon verifies that the on-disk index still has the same
> > signature, then sends the in-mem index to git. When git updates the
> > index, it pokes the daemon again to update in-mem index. Next time git
> > reads the index, it does not have to pay I/O cost any more (actually
> > it does but the cost is hidden away when you do not have to read it
> > yet).
> 
> If we are going this far, maybe it is worthwhile building a mmap()
> region the daemon exports to the git client that holds the "in memory"
> format of the index. Clients would mmap this PROT_READ, MAP_PRIVATE
> and can then quickly access the base file information without doing
> further validation, or copying the large(ish) data over a pipe.

The below patch implements such a daemon to cache the index. It takes 91ms and 377ms to load a 25MB index with and without the daemon. I use share memory instead of pipe, but the format is still "on disk" not "in memory" for simplicity. I think we're good even without in memory format.

The daemon should work on Windows after shm_open and unix socket are replaced with the equivalents. Then we could cache name-hash in it too.

With all improvements on (index v4, split index, preload index, untracked cache, read-cache daemon), "git status" goes from 1.8s to 0.6s on webkit.git (the CPU is clocked at 800 MHz so this is close to "poor machine" case).

Time to convince Junio it's good and push bit by bit to master :)
-- 8< --
diff --git a/.gitignore b/.gitignore
index 70992a4..07e0cb6 100644
--- a/.gitignore
+++ b/.gitignore
@@ -110,6 +110,7 @@
 /git-pull
 /git-push
 /git-quiltimport
+/git-read-cache--daemon
 /git-read-tree
 /git-rebase
 /git-rebase--am
diff --git a/Makefile b/Makefile
index 028749b..98d22de 100644
--- a/Makefile
+++ b/Makefile
@@ -1502,6 +1502,12 @@ ifdef HAVE_DEV_TTY
 	BASIC_CFLAGS += -DHAVE_DEV_TTY
 endif
 
+ifdef HAVE_SHM
+	BASIC_CFLAGS += -DHAVE_SHM
+	EXTLIBS += -lrt
+	PROGRAM_OBJS += read-cache--daemon.o
+endif
+
 ifdef DIR_HAS_BSD_GROUP_SEMANTICS
 	COMPAT_CFLAGS += -DDIR_HAS_BSD_GROUP_SEMANTICS
 endif
diff --git a/cache.h b/cache.h
index 99854c7..5251bda 100644
--- a/cache.h
+++ b/cache.h
@@ -290,10 +290,14 @@ struct index_state {
 	struct split_index *split_index;
 	struct cache_time timestamp;
 	unsigned name_hash_initialized : 1,
+		 keep_mmap : 1,
+		 poke_daemon : 1,
 		 initialized : 1;
 	struct hashmap name_hash;
 	struct hashmap dir_hash;
 	unsigned char sha1[20];
+	void *mmap;
+	size_t mmap_size;
 };
 
 extern struct index_state the_index;
diff --git a/config.mak.uname b/config.mak.uname
index 23a8803..b6a37e5 100644
--- a/config.mak.uname
+++ b/config.mak.uname
@@ -33,6 +33,7 @@ ifeq ($(uname_S),Linux)
 	HAVE_PATHS_H = YesPlease
 	LIBC_CONTAINS_LIBINTL = YesPlease
 	HAVE_DEV_TTY = YesPlease
+	HAVE_SHM = YesPlease
 endif
 ifeq ($(uname_S),GNU/kFreeBSD)
 	NO_STRLCPY = YesPlease
diff --git a/git-compat-util.h b/git-compat-util.h
index f6d3a46..b2116ab 100644
--- a/git-compat-util.h
+++ b/git-compat-util.h
@@ -723,4 +723,12 @@ struct tm *git_gmtime_r(const time_t *, struct tm *);
 #define gmtime_r git_gmtime_r
 #endif
 
+#ifndef HAVE_SHM
+static inline int shm_open(const char *path, int flags, int mode)
+{
+	errno = ENOSYS;
+	return -1;
+}
+#endif
+
 #endif
diff --git a/read-cache--daemon.c b/read-cache--daemon.c
new file mode 100644
index 0000000..32a5aa7
--- /dev/null
+++ b/read-cache--daemon.c
@@ -0,0 +1,168 @@
+#include "cache.h"
+#include "sigchain.h"
+#include "unix-socket.h"
+#include "split-index.h"
+#include "pkt-line.h"
+
+static char *socket_path;
+static struct strbuf shm_index = STRBUF_INIT;
+static struct strbuf shm_sharedindex = STRBUF_INIT;
+
+static void cleanup_socket(void)
+{
+	if (socket_path)
+		unlink(socket_path);
+	if (shm_index.len)
+		shm_unlink(shm_index.buf);
+	if (shm_sharedindex.len)
+		shm_unlink(shm_sharedindex.buf);
+}
+
+static void cleanup_socket_on_signal(int sig)
+{
+	cleanup_socket();
+	sigchain_pop(sig);
+	raise(sig);
+}
+
+static void share_index(struct index_state *istate, struct strbuf *shm_path)
+{
+	struct strbuf sb = STRBUF_INIT;
+	void *map;
+	int fd;
+
+	strbuf_addf(&sb, "/git-index-%s", sha1_to_hex(istate->sha1));
+	if (shm_path->len && strcmp(sb.buf, shm_path->buf)) {
+		shm_unlink(shm_path->buf);
+		strbuf_reset(shm_path);
+	}
+	fd = shm_open(sb.buf, O_RDWR | O_CREAT | O_TRUNC, 0700);
+	if (fd < 0)
+		return;
+	/*
+	 * We "lock" the shm in preparation by set its size larger
+	 * than expected. The reader is supposed to check the size and
+	 * ignore if shm size is different than the actual file size
+	 */
+	if (ftruncate(fd, istate->mmap_size + 1)) {
+		close(fd);
+		shm_unlink(shm_path->buf);
+		return;
+	}
+	strbuf_addbuf(shm_path, &sb);
+	map = xmmap(NULL, istate->mmap_size, PROT_READ | PROT_WRITE,
+		    MAP_SHARED, fd, 0);
+	if (map == MAP_FAILED) {
+		close(fd);
+		shm_unlink(shm_path->buf);
+		return;
+	}
+	memcpy(map, istate->mmap, istate->mmap_size);
+	munmap(map, istate->mmap_size);
+	/* Now "unlock" it */
+	if (ftruncate(fd, istate->mmap_size)) {
+		close(fd);
+		shm_unlink(shm_path->buf);
+		return;
+	}
+	close(fd);
+}
+
+static void refresh()
+{
+	the_index.keep_mmap = 1;
+	if (read_cache() < 0)
+		die("could not read index");
+	share_index(&the_index, &shm_index);
+	if (the_index.split_index &&
+	    the_index.split_index->base)
+		share_index(the_index.split_index->base, &shm_sharedindex);
+	discard_index(&the_index);
+	fprintf(stderr, "refreshed\n");
+}
+
+static unsigned long next;
+static int serve_cache_loop(int fd)
+{
+	struct pollfd pfd;
+	unsigned long now = time(NULL);
+
+	if (now > next)
+		return 0;
+
+	pfd.fd = fd;
+	pfd.events = POLLIN;
+	if (poll(&pfd, 1, 1000 * (next - now)) < 0) {
+		if (errno != EINTR)
+			die_errno("poll failed");
+		return 1;
+	}
+
+	if (pfd.revents & POLLIN) {
+		int client = accept(fd, NULL, NULL);
+		if (client < 0) {
+			warning("accept failed: %s", strerror(errno));
+			return 1;
+		}
+		refresh();
+		close(client);
+		next = now + 600;
+	}
+	return 1;
+}
+
+static void serve_cache(const char *socket_path)
+{
+	int fd;
+
+	fd = unix_stream_listen(socket_path);
+	if (fd < 0)
+		die_errno("unable to bind to '%s'", socket_path);
+
+	refresh();
+
+	printf("ok\n");
+	fclose(stdout);
+
+	next = time(NULL) + 600;
+	while (serve_cache_loop(fd))
+		; /* nothing */
+
+	close(fd);
+	unlink(socket_path);
+}
+
+static void check_socket_directory(const char *path)
+{
+	struct stat st;
+	char *path_copy = xstrdup(path);
+	char *dir = dirname(path_copy);
+
+	if (!stat(dir, &st)) {
+		free(path_copy);
+		return;
+	}
+
+	/*
+	 * We must be sure to create the directory with the correct mode,
+	 * not just chmod it after the fact; otherwise, there is a race
+	 * condition in which somebody can chdir to it, sleep, then try to open
+	 * our protected socket.
+	 */
+	if (safe_create_leading_directories_const(dir) < 0)
+		die_errno("unable to create directories for '%s'", dir);
+	if (mkdir(dir, 0700) < 0)
+		die_errno("unable to mkdir '%s'", dir);
+	free(path_copy);
+}
+
+int main(int argc, const char **argv)
+{
+	setup_git_directory();
+	socket_path = git_pathdup("daemon/index");
+	check_socket_directory(socket_path);
+	atexit(cleanup_socket);
+	sigchain_push_common(cleanup_socket_on_signal);
+	serve_cache(socket_path);
+	return 0;
+}
diff --git a/read-cache.c b/read-cache.c
index 42eac62..7ab6fb5 100644
--- a/read-cache.c
+++ b/read-cache.c
@@ -16,6 +16,7 @@
 #include "varint.h"
 #include "split-index.h"
 #include "sigchain.h"
+#include "unix-socket.h"
 
 static struct cache_entry *refresh_cache_entry(struct cache_entry *ce,
 					       unsigned int options);
@@ -1332,6 +1333,8 @@ static int verify_hdr(struct cache_header *hdr, unsigned long size)
 	hdr_version = ntohl(hdr->hdr_version);
 	if (hdr_version < INDEX_FORMAT_LB || INDEX_FORMAT_UB < hdr_version)
 		return error("bad index version %d", hdr_version);
+	if (!size)
+		return 0;
 	git_SHA1_Init(&c);
 	git_SHA1_Update(&c, hdr, size - 20);
 	git_SHA1_Final(sha1, &c);
@@ -1462,6 +1465,35 @@ static struct cache_entry *create_from_disk(struct ondisk_cache_entry *ondisk,
 	return ce;
 }
 
+static void *try_shm(void *mmap, size_t mmap_size)
+{
+	struct strbuf sb = STRBUF_INIT;
+	void *new_mmap;
+	struct stat st;
+	int fd;
+
+	if (mmap_size <= 20)
+		return mmap;
+
+	strbuf_addf(&sb, "/git-index-%s",
+		    sha1_to_hex((unsigned char *)mmap + mmap_size - 20));
+	fd = shm_open(sb.buf, O_RDONLY, 0777);
+	strbuf_release(&sb);
+	if (fd < 0)
+		return mmap;
+	if (fstat(fd, &st) || st.st_size != mmap_size) {
+		close(fd);
+		return mmap;
+	}
+	new_mmap = xmmap(NULL, mmap_size, PROT_READ, MAP_PRIVATE, fd, 0);
+	close(fd);
+	if (new_mmap == MAP_FAILED)
+		return mmap;
+	munmap(mmap, mmap_size);
+	return new_mmap;
+}
+
+
 /* remember to discard_cache() before reading a different cache! */
 int do_read_index(struct index_state *istate, const char *path, int must_exist)
 {
@@ -1469,7 +1501,7 @@ int do_read_index(struct index_state *istate, const char *path, int must_exist)
 	struct stat st;
 	unsigned long src_offset;
 	struct cache_header *hdr;
-	void *mmap;
+	void *mmap, *old_mmap;
 	size_t mmap_size;
 	struct strbuf previous_name_buf = STRBUF_INIT, *previous_name;
 
@@ -1495,11 +1527,23 @@ int do_read_index(struct index_state *istate, const char *path, int must_exist)
 	mmap = xmmap(NULL, mmap_size, PROT_READ | PROT_WRITE, MAP_PRIVATE, fd, 0);
 	if (mmap == MAP_FAILED)
 		die_errno("unable to map index file");
+	if (istate->keep_mmap) {
+		istate->mmap = mmap;
+		istate->mmap_size = mmap_size;
+	}
 	close(fd);
 
+	old_mmap = mmap;
+	mmap = try_shm(old_mmap, mmap_size);
 	hdr = mmap;
-	if (verify_hdr(hdr, mmap_size) < 0)
-		goto unmap;
+	if (old_mmap == mmap) {
+		if (verify_hdr(hdr, mmap_size) < 0)
+			goto unmap;
+	} else {
+		if (verify_hdr(hdr, 0) < 0)
+			goto unmap;
+		istate->poke_daemon = 1;
+	}
 
 	hashcpy(istate->sha1, (const unsigned char *)hdr + mmap_size - 20);
 	istate->version = ntohl(hdr->hdr_version);
@@ -1547,10 +1591,12 @@ int do_read_index(struct index_state *istate, const char *path, int must_exist)
 		src_offset += 8;
 		src_offset += extsize;
 	}
-	munmap(mmap, mmap_size);
+	if (!istate->keep_mmap)
+		munmap(mmap, mmap_size);
 	return istate->cache_nr;
 
 unmap:
+	istate->mmap = NULL;
 	munmap(mmap, mmap_size);
 	die("index file corrupt");
 }
@@ -1576,6 +1622,7 @@ int read_index_from(struct index_state *istate, const char *path)
 		discard_index(split_index->base);
 	else
 		split_index->base = xcalloc(1, sizeof(*split_index->base));
+	split_index->base->keep_mmap = istate->keep_mmap;
 	ret = do_read_index(split_index->base,
 			    git_path("sharedindex.%s",
 				     sha1_to_hex(split_index->base_sha1)), 1);
@@ -1618,6 +1665,10 @@ int discard_index(struct index_state *istate)
 	free(istate->cache);
 	istate->cache = NULL;
 	istate->cache_alloc = 0;
+	if (istate->keep_mmap && istate->mmap) {
+		munmap(istate->mmap, istate->mmap_size);
+		istate->mmap = NULL;
+	}
 	discard_split_index(istate);
 	return 0;
 }
@@ -2071,12 +2122,14 @@ int write_locked_index(struct index_state *istate, struct lock_file *lock,
 		       unsigned flags)
 {
 	struct split_index *si = istate->split_index;
+	int ret;
 
 	if (!si || alternate_index_output ||
 	    (istate->cache_changed & ~EXTMASK)) {
 		if (si)
 			hashclr(si->base_sha1);
-		return do_write_locked_index(istate, lock, flags);
+		ret = do_write_locked_index(istate, lock, flags);
+		goto done;
 	}
 
 	if (getenv("GIT_TEST_SPLIT_INDEX")) {
@@ -2090,7 +2143,13 @@ int write_locked_index(struct index_state *istate, struct lock_file *lock,
 			return ret;
 	}
 
-	return write_split_index(istate, lock, flags);
+	ret = write_split_index(istate, lock, flags);
+done:
+	if (!ret && istate->poke_daemon) {
+		int fd = unix_stream_connect(git_path("daemon/index"));
+		close(fd);
+	}
+	return ret;
 }
 
 /*
-- 8< --
Previous: Duy NguyenNext: Junio C Hamano
Message 43 of 75 in “Split index mode for very large indexes”
  1. 00/32 Split index mode for very large indexesNguyễn Thái Ngọc Duy, Apr 28, 2014
  2. 01/32 ewah: fix constness of ewah_read_mmapNguyễn Thái Ngọc Duy, Apr 28, 2014
  3. 02/32 ewah: delete unused ewah_read_mmap_native declarationNguyễn Thái Ngọc Duy, Apr 28, 2014
  4. 03/32 sequencer: do not update/refresh index if the lock cannot be heldNguyễn Thái Ngọc Duy, Apr 28, 2014
  5. 04/32 read-cache: new API write_locked_index instead of write_index/write_cacheNguyễn Thái Ngọc Duy, Apr 28, 2014
  6. 05/32 read-cache: relocate and unexport commit_locked_index()Nguyễn Thái Ngọc Duy, Apr 28, 2014
  7. 06/32 read-cache: store in-memory flags in the first 12 bits of ce_flagsNguyễn Thái Ngọc Duy, Apr 28, 2014
  8. 07/32 read-cache: be strict about "changed" in remove_marked_cache_entries()Nguyễn Thái Ngọc Duy, Apr 28, 2014
  9. 08/32 read-cache: be specific what part of the index has changedNguyễn Thái Ngọc Duy, Apr 28, 2014
  10. 09/32 update-index: be specific what part of the index has changedNguyễn Thái Ngọc Duy, Apr 28, 2014
  11. 10/32 resolve-undo: be specific what part of the index has changedNguyễn Thái Ngọc Duy, Apr 28, 2014
  12. 11/32 unpack-trees: be specific what part of the index has changedNguyễn Thái Ngọc Duy, Apr 28, 2014
  13. 12/32 cache-tree: mark istate->cache_changed on cache tree invalidationNguyễn Thái Ngọc Duy, Apr 28, 2014
  14. 13/32 cache-tree: mark istate->cache_changed on cache tree updateNguyễn Thái Ngọc Duy, Apr 28, 2014
  15. 14/32 cache-tree: mark istate->cache_changed on prime_cache_tree()Nguyễn Thái Ngọc Duy, Apr 28, 2014
  16. 15/32 entry.c: update cache_changed if refresh_cache is set in checkout_entry()Nguyễn Thái Ngọc Duy, Apr 28, 2014
  17. 16/32 read-cache: save index SHA-1 after readingNguyễn Thái Ngọc Duy, Apr 28, 2014
  18. 17/32 read-cache: split-index modeNguyễn Thái Ngọc Duy, Apr 28, 2014
  19. Junio C HamanoApr 28, 2014
  20. Duy NguyenApr 29, 2014
  21. Junio C HamanoApr 29, 2014
  22. Duy NguyenApr 29, 2014
  23. Junio C HamanoApr 30, 2014
  24. 18/32 read-cache: mark new entries for split indexNguyễn Thái Ngọc Duy, Apr 28, 2014
  25. Eric SunshineApr 30, 2014
  26. 19/32 read-cache: save deleted entries in split indexNguyễn Thái Ngọc Duy, Apr 28, 2014
  27. 20/32 read-cache: mark updated entries for split indexNguyễn Thái Ngọc Duy, Apr 28, 2014
  28. 21/32 split-index: the writing partNguyễn Thái Ngọc Duy, Apr 28, 2014
  29. 22/32 split-index: the reading partNguyễn Thái Ngọc Duy, Apr 28, 2014
  30. 23/32 split-index: do not invalidate cache-tree at read timeNguyễn Thái Ngọc Duy, Apr 28, 2014
  31. 24/32 split-index: strip pathname of on-disk replaced entriesNguyễn Thái Ngọc Duy, Apr 28, 2014
  32. Junio C HamanoApr 29, 2014
  33. 25/32 update-index: new options to enable/disable split index modeNguyễn Thái Ngọc Duy, Apr 28, 2014
  34. 26/32 update-index --split-index: do not split if $GIT_DIR is read onlyNguyễn Thái Ngọc Duy, Apr 28, 2014
  35. 27/32 rev-parse: add --shared-index-path to get shared index pathNguyễn Thái Ngọc Duy, Apr 28, 2014
  36. 28/32 read-tree: force split-index mode off on --index-outputNguyễn Thái Ngọc Duy, Apr 28, 2014
  37. 29/32 read-tree: note about dropping split-index mode or index versionNguyễn Thái Ngọc Duy, Apr 28, 2014
  38. 30/32 read-cache: force split index mode with GIT_TEST_SPLIT_INDEXNguyễn Thái Ngọc Duy, Apr 28, 2014
  39. 31/32 t2104: make sure split index mode is off for the version testNguyễn Thái Ngọc Duy, Apr 28, 2014
  40. 32/32 t1700: new tests for split-index modeNguyễn Thái Ngọc Duy, Apr 28, 2014
  41. Shawn PearceApr 28, 2014
  42. Duy NguyenApr 29, 2014
  43. Duy NguyenMay 9, 2014
  44. Junio C HamanoMay 9, 2014
  45. 0/8 Speed up cache loading timeNguyễn Thái Ngọc Duy, May 13, 2014
  46. 1/8 read-cache: allow to keep mmap'd memory after readingNguyễn Thái Ngọc Duy, May 13, 2014
  47. 2/3 Add read-cache--daemonNguyễn Thái Ngọc Duy, May 13, 2014
  48. Erik Faye-LundMay 13, 2014
  49. Duy NguyenMay 13, 2014
  50. Duy NguyenMay 13, 2014
  51. Erik Faye-LundMay 13, 2014
  52. Duy NguyenMay 13, 2014
  53. Erik Faye-LundMay 13, 2014
  54. Duy NguyenMay 13, 2014
  55. Erik Faye-LundMay 13, 2014
  56. 2/8 unix-socket: stub impl. for platforms with no unix socket supportNguyễn Thái Ngọc Duy, May 13, 2014
  57. Erik Faye-LundMay 13, 2014
  58. Erik Faye-LundMay 13, 2014
  59. 3/8 daemonize: set a flag before exiting the main processNguyễn Thái Ngọc Duy, May 13, 2014
  60. 3/3 read-cache: try index data from shared memoryNguyễn Thái Ngọc Duy, May 13, 2014
  61. 4/8 Add read-cache--daemon for caching index and related stuffNguyễn Thái Ngọc Duy, May 13, 2014
  62. Erik Faye-LundMay 13, 2014
  63. 5/8 read-cache: try index data from shared memoryNguyễn Thái Ngọc Duy, May 13, 2014
  64. Erik Faye-LundMay 13, 2014
  65. 6/8 read-cache--daemon: do not read index from shared memoryNguyễn Thái Ngọc Duy, May 13, 2014
  66. 7/8 read-cache: skip verifying trailing SHA-1 on cached indexNguyễn Thái Ngọc Duy, May 13, 2014
  67. 8/8 read-cache: inform the daemon that the index has been updatedNguyễn Thái Ngọc Duy, May 13, 2014
  68. Erik Faye-LundMay 13, 2014
  69. David TurnerMay 22, 2014
  70. Stefan BellerMay 13, 2014
  71. Duy NguyenMay 13, 2014
  72. 9/8 even faster loading time with index version 254Nguyễn Thái Ngọc Duy, May 13, 2014
  73. Junio C HamanoApr 28, 2014
  74. Richard HansenApr 30, 2014
  75. Duy NguyenMay 1, 2014

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