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[PATCH v4 10/24] documentation: add documentation of the index-v5 file format

From
Thomas Gummerer <t.gummerer@gmail.com>
Date
Nov 27, 2013, 12:00 UTC
Message-ID
<1385553659-9928-11-git-send-email-t.gummerer@gmail.com>
In-Reply-To
<1385553659-9928-1-git-send-email-t.gummerer@gmail.com>

Add a documentation of the index file format version 5 to Documentation/technical.

Helped-by: Michael Haggerty <mhagger@alum.mit.edu>
Helped-by: Junio C Hamano <gitster@pobox.com>
Helped-by: Thomas Rast <trast@student.ethz.ch>
Helped-by: Nguyen Thai Ngoc Duy <pclouds@gmail.com>
Helped-by: Robin Rosenberg <robin.rosenberg@dewire.com>
Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
---
 Documentation/technical/index-file-format-v5.txt | 294 +++++++++++++++++++++++
 1 file changed, 294 insertions(+)
 create mode 100644 Documentation/technical/index-file-format-v5.txt
diff --git a/Documentation/technical/index-file-format-v5.txt b/Documentation/technical/index-file-format-v5.txt
new file mode 100644
index 0000000..1bd8a23
--- /dev/null
+++ b/Documentation/technical/index-file-format-v5.txt
@@ -0,0 +1,294 @@
+GIT index format
+================
+
+== The git index
+
+   The git index file (.git/index) documents the status of the files
+     in the git staging area.
+
+   The staging area is used for preparing commits, merging, etc.
+
+== The git index file format
+
+   All binary numbers are in network byte order. Version 5 is described
+     here. The index file consists of various sections. They appear in
+     the following order in the file.
+
+   - header: the description of the index format, including it's signature,
+     version and various other fields that are used internally.
+
+   - diroffsets (ndir entries of "direcotry offset"): A 4-byte offset
+       relative to the beginning of the "direntries block" (see below)
+       for each of the ndir directories in the index, sorted by pathname
+       (of the directory it's pointing to). [1]
+
+   - direntries (ndir entries of "directory offset"): A directory entry
+       for each of the ndir directories in the index, sorted by pathname
+       (see below). [2]
+
+   - fileoffsets (nfile entries of "file offset"): A 4-byte offset
+       relative to the beginning of the fileentries block (see below)
+       for each of the nfile files in the index. [1]
+
+   - fileentries (nfile entries of "file entry"): A file entry for
+       each of the nfile files in the index (see below).
+
+   - Extensions (Currently REUC, see below for details)
+
+     Extensions are identified by signature. Optional extensions can
+     be ignored if GIT does not understand them.
+
+     GIT supports an arbitrary number of extension, but currently none
+     is implemented. [3]
+
+     extsig (32-bits): extension signature. If the first byte is 'A'..'Z'
+     the extension is optional and can be ignored.
+
+     extsize (32-bits): number of entries in the extension
+
+     extchecksum (32-bits): crc32 checksum of the extension signature
+       and size.
+
+    - Extension data.
+
+== Header
+   sig (32-bits): Signature:
+     The signature is { 'D', 'I', 'R', 'C' } (stands for "dircache")
+
+   vnr (32-bits): Version number:
+     The current supported versions are 2, 3, 4 and 5.
+
+   nfile (32-bits): number of file entries in the index.
+
+   ndir (32-bits): number of directories in the index.
+
+   fblockoffset (32-bits): offset to the file block, relative to the
+     beginning of the file.
+
+   - Offset to the extensions.
+
+     nextensions (32-bits): number of extensions.
+
+     extoffset (32-bits): offset to the extension. (Possibly none, as
+       many as indicated in the 4-byte number of extensions)
+
+   headercrc (32-bits): crc checksum including the header and the
+     offsets to the extensions.
+
+
+== Directory offsets (diroffsets)
+
+  diroffset (32-bits): offset to the directory relative to the
+    beginning of the index file. There are ndir + 1 offsets in the
+    diroffset table, the last is pointing to the end of the last
+    direntry. With this last entry, we are able to replace the strlen
+    of the directory name when reading the directory name, by
+    calculating it from diroffset[n+1]-diroffset[n]-61.  61 is the
+    size of the directory data, which follows each each directory +
+    the crc sum + the NUL byte.
+
+  This part is needed for making the directory entries bisectable and
+    thus allowing a binary search.
+
+== Directory entry (direntries)
+
+  Directory entries are sorted in lexicographic order by the name
+    of their path starting with the root.
+
+  foffset (32-bits): offset to the lexicographically first file in
+    the file offsets (fileoffsets), relative to the beginning of
+    the fileoffset block.
+
+  cr (32-bits): offset to conflicted/resolved data at the end of the
+    index. 0 if there is no such data. [4]
+
+  ncr (32-bits): number of conflicted/resolved data entries at the
+    end of the index if the offset is non 0. If cr is 0, ncr is
+    also 0.
+
+  nsubtrees (32-bits): number of subtrees this tree has in the index.
+
+  nfiles (32-bits): number of files in the directory, that are in
+    the index.
+
+  nentries (32-bits): number of entries in the index that is covered
+    by the tree this entry represents. (-1 if the entry is invalid).
+    This number includes all the files in this tree, recursively.
+
+  objname (160-bits): object name for the object that would result
+    from writing this span of index as a tree. This is only valid
+    if nentries is valid, meaning the cache-tree is valid.
+
+  flags (32-bits): 'flags' field split into (high to low bits) (For
+    D/F conflicts)
+
+    stage (2-bits): stage of the directory during merge
+
+    30-bit unused
+
+  pathname (variable length, nul terminated): relative to top level
+    directory (without the leading slash). '/' is used as path
+    separator. A string of length 0 ('') indicates the root directory.
+    The special path components ".", and ".." (without quotes) are
+    disallowed. The path also includes a trailing slash. [9]
+
+  dircrc (32-bits): crc32 checksum for each directory entry.
+
+  The last 4-byte number of entries and the 160-bit object name are
+    for the cache tree. An entry can be in an invalidated state which is
+    represented by having -1 in the entry_count field.
+
+  The entries are written out in the top-down, depth-first order. The
+    first entry represents the root level of the repository, followed by
+    the first subtree - let's call it A - of the root level, followed by
+    the first subtree of A, ... There is no prefix compression for
+    directories.
+
+== File offsets (fileoffsets)
+
+  fileoffset (32-bits): offset to the file relative to the beginning of
+    the fileentries block.
+
+  This part is needed for making the file entries bisectable and
+    thus allowing a binary search. There are nfile + 1 offsets in the
+    fileoffset table, the last is pointing to the end of the last
+    fileentry. With this last entry, we can replace the strlen when
+    reading each filename, by calculating its length with the offsets.
+
+== File entry (fileentries)
+
+  File entries are sorted in ascending order on the name field, after the
+  respective offset given by the directory entries. All file names are
+  prefix compressed, meaning the file name is relative to the directory.
+
+  flags (16-bits): 'flags' field split into (high to low bits)
+
+    assumevalid (1-bit): assume-valid flag
+
+    intenttoadd (1-bit): intent-to-add flag, used by "git add -N".
+      Extended flag in index v3.
+
+    stage (2-bit): stage of the file during merge
+
+    skipworktree (1-bit): skip-worktree flag, used by sparse checkout.
+      Extended flag in index v3.
+
+    smudged (1-bit): indicates if the file is racily smudged.
+
+    invalid (1-bit): This bit can be set to indicate that a file was
+      deleted, but not yet removed from the index, because the index
+      was only partially rewritten.  Entries with this flags should be
+      ignored when reading the index file.
+
+    9-bit unused, must be zero [6]
+
+  mode (16-bits): file mode, split into (high to low bits)
+
+    objtype (4-bits): object type
+      valid values in binary are 1000 (regular file), 1010 (symbolic
+      link) and 1110 (gitlink)
+
+    3-bit unused
+
+    permission (9-bits): unix permission. Only 0755 and 0644 are valid
+      for regular files. Symbolic links and gitlinks have value 0 in
+      this field.
+
+  mtimes (32-bits): mtime seconds, the last time a file's data changed
+    this is stat(2) data
+
+  mtimens (32-bits): mtime nanosecond fractions
+    this is stat(2) data
+
+  file size (32-bits): The on-disk size, trucated to 32-bit.
+    this is stat(2) data
+
+  statcrc (32-bits): crc32 checksum over ctime seconds, ctime
+    nanoseconds, ino, dev, uid, gid (All stat(2) data
+    except mtime and file size). If the statcrc is 0 it will
+    be ignored. [7]
+
+  objhash (160-bits): SHA-1 for the represented object
+
+  filename (variable length, nul terminated). The exact encoding is
+    undefined, but the filename cannot contain a NUL byte (iow, the same
+    encoding as a UNIX pathname).
+
+  entrycrc (32-bits): crc32 checksum for the file entry.
+
+== Resolve undo extension
+
+  Stores resolved entries and conflicts in the index.  When a conflict
+  is resolved (e.g. with "git add path), a bit is flipped to indicate
+  the resolution.  This way conflicts can be recreated (e.g. with "git
+  checkout -m", in case users want to redo a conflict resolution from
+  scratch.
+
+  The conflicts will also be stored in the fileentries part of the index,
+  to simplify reading and writing of the index.
+
+  filename (variable length, nul terminated): filename of the entry,
+    relative to its containing directory).
+
+  nfileconflicts (32-bits): number of conflicts for the file [8]
+
+  flags (nfileconflicts entries of "flags") (16-bits): 'flags' field
+    split into:
+
+    conflicted (1-bit): conflicted state (conflicted/resolved) (1 if
+      conflicted)
+
+    stage (2-bits): stage during merge.
+
+    13-bit unused
+
+  entry_mode (nfileconflicts entries of "entry mode") (16-bits):
+    octal numbers, entry mode of eache entry in the different stages.
+    (How many is defined by the 4-byte number before)
+
+  objectnames (nfileconflicts entries of "object name") (160-bits):
+    object names  of the different stages.
+
+  conflictcrc (32-bits): crc32 checksum over conflict data.
+
+== Design explanations
+
+[1] The directory and file offsets are included in the index format
+    to enable bisectability of the index, for binary searches.Updating
+    a single entry and partial reading will benefit from this.
+
+[2] The directories are saved in their own block, to be able to
+    quickly search for a directory in the index. They include a
+    offset to the (lexically) first file in the directory.
+
+[3] The data of the cache-tree extension and the resolve undo
+    extension is now part of the index itself, but if other extensions
+    come up in the future, there is no need to change the index, they
+    can simply be added at the end.
+
+[4] To avoid rewrites of the whole index when there are conflicts or
+    conflicts are being resolved, conflicted data will be stored at
+    the end of the index. To mark the conflict resolved, just a bit
+    has to be flipped. The data will still be there, if a user wants
+    to redo the conflict resolution.
+
+[5] Since only 4 modes are effectively allowed in git but 32-bit are
+    used to store them, having a two bit flag for the mode is enough
+    and saves 4 byte per entry.
+
+[6] The length of the file name was dropped, since each file name is
+    nul terminated anyway.
+
+[7] Since all stat data (except mtime and ctime) is just used for
+    checking if a file has changed a checksum of the data is enough.
+    In addition to that Thomas Rast suggested ctime could be ditched
+    completely (core.trustctime=false) and thus included in the
+    checksum. This would save 24 bytes per index entry, which would
+    be about 4 MB on the Webkit index.
+    (Thanks for the suggestion to Michael Haggerty)
+
+[8] Since there can be more stage #1 entries, it is necessary to know
+    the number of conflict data entries there are.
+
+[9] As Michael Haggerty pointed out on the mailing list, storing the
+    trailing slash will simplify a few operations.
-- 
1.8.4.2
Previous: Thomas GummererNext: Thomas Gummerer
Message 15 of 41 in “Index-v5”
  1. 00/24 Index-v5Thomas Gummerer, Nov 27, 2013
  2. 01/24 t2104: Don't fail for index versions other than [23]Thomas Gummerer, Nov 27, 2013
  3. 02/24 read-cache: split index file version specific functionalityThomas Gummerer, Nov 27, 2013
  4. 03/24 read-cache: move index v2 specific functions to their own fileThomas Gummerer, Nov 27, 2013
  5. 04/24 read-cache: Re-read index if index file changedThomas Gummerer, Nov 27, 2013
  6. 05/24 add documentation for the index apiThomas Gummerer, Nov 27, 2013
  7. 06/24 read-cache: add index reading apiThomas Gummerer, Nov 27, 2013
  8. 07/24 make sure partially read index is not changedThomas Gummerer, Nov 27, 2013
  9. 08/24 grep.c: use index apiThomas Gummerer, Nov 27, 2013
  10. 09/24 ls-files.c: use index apiThomas Gummerer, Nov 27, 2013
  11. Duy NguyenNov 30, 2013
  12. Thomas GummererNov 30, 2013
  13. Antoine PelisseNov 30, 2013
  14. Thomas GummererNov 30, 2013
  15. 10/24 documentation: add documentation of the index-v5 file formatThomas Gummerer, Nov 27, 2013
  16. 11/24 read-cache: make in-memory format aware of stat_crcThomas Gummerer, Nov 27, 2013
  17. 12/24 read-cache: read index-v5Thomas Gummerer, Nov 27, 2013
  18. Duy NguyenNov 30, 2013
  19. Thomas GummererNov 30, 2013
  20. Antoine PelisseNov 30, 2013
  21. Thomas GummererNov 30, 2013
  22. Antoine PelisseNov 30, 2013
  23. Thomas GummererNov 30, 2013
  24. 13/24 read-cache: read resolve-undo dataThomas Gummerer, Nov 27, 2013
  25. 14/24 read-cache: read cache-tree in index-v5Thomas Gummerer, Nov 27, 2013
  26. 15/24 read-cache: write index-v5Thomas Gummerer, Nov 27, 2013
  27. 16/24 read-cache: write index-v5 cache-tree dataThomas Gummerer, Nov 27, 2013
  28. 17/24 read-cache: write resolve-undo data for index-v5Thomas Gummerer, Nov 27, 2013
  29. 18/24 update-index.c: rewrite index when index-version is givenThomas Gummerer, Nov 27, 2013
  30. 19/24 p0003-index.sh: add perf test for the index formatsThomas Gummerer, Nov 27, 2013
  31. 20/24 introduce GIT_INDEX_VERSION environment variableThomas Gummerer, Nov 27, 2013
  32. Eric SunshineNov 27, 2013
  33. Junio C HamanoNov 27, 2013
  34. Thomas GummererNov 28, 2013
  35. 21/24 test-lib: allow setting the index format versionThomas Gummerer, Nov 27, 2013
  36. 22/24 t1600: add index v5 specific testsThomas Gummerer, Nov 27, 2013
  37. 23/24 POC for partial writingThomas Gummerer, Nov 27, 2013
  38. Duy NguyenNov 30, 2013
  39. Thomas GummererNov 30, 2013
  40. 24/24 perf: add partial writing testThomas Gummerer, Nov 27, 2013
  41. Thomas GummererDec 9, 2013

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