threads / patch / 42079

patch, 5 partsfix deadlock in git-push

Subject: [PATCH 0/5] fix deadlock in git-push

## tl;dr

10 messages between Apr 19, 2016 and Apr 21, 2016. Diffs are folded; open one to read it.

replies: 9people: 3as markdown or json

Jeff King· Apr 19, 2016, 22:39 UTC · lore

I ran across a deadlock today while pushing from a corrupted repository where pack-objects fails. Obviously I don't expect this to succeed, but it should not hang indefinitely.

The first patch below fixes the deadlock. Unfortunately, it turns it into a likely SIGPIPE death. Which is an improvement, but not ideal.

Patches 2 and 3 address that by fixing the way we handle SIGPIPE in async threads.

Patches 4 and 5 are cleanups to earlier topics that are enabled by the new SIGPIPE handling.

  [1/5]: send-pack: close demux pipe before finishing async process
  [2/5]: run-command: teach async threads to ignore SIGPIPE
  [3/5]: send-pack: isolate sigpipe in demuxer thread
  [4/5]: fetch-pack: isolate sigpipe in demuxer thread
  [5/5]: t5504: drop sigpipe=ok from push tests

I confirmed that after this series we still pass the stress test I outlined in

  http://article.gmane.org/gmane.comp.version-control.git/287176

So hopefully I haven't made anything worse (and that the tightening in 5/5 isn't just bringing back some test flakiness).

-Peff
Jeff King· Apr 19, 2016, 22:45 UTC · re: Jeff King · lore

[PATCH 1/5] send-pack: close demux pipe before finishing async process

This fixes a deadlock on the client side when pushing a large number of refs from a corrupted repo. There's a reproduction script below, but let's start with a human-readable explanation.

The client side of a push goes something like this:
  1. Start an async process to demux sideband coming from
     the server.
  2. Run pack-objects to send the actual pack, and wait for
     its status via finish_command().
  3. If pack-objects failed, abort immediately.
  4. If pack-objects succeeded, read the per-ref status from
     the server, which is actually coming over a pipe from
     the demux process started in step 1.

We run finish_async() to wait for and clean up the demux process in two places. In step 3, if we see an error, we want it to end early. And after step 4, it should be done writing any data and we are just cleaning it up.

Let's focus on the error case first. We hand the output descriptor to the server over to pack-objects. So by the time it has returned an error to us, it has closed the descriptor and the server has gotten EOF. The server will mark all refs as failed with "unpacker error" and send us back the status for each (followed by EOF).

This status goes to the demuxer thread, which relays it over a pipe to the main thread. But the main thread never even tries reading the status. It's trying to bail because of the pack-objects error, and is waiting for the demuxer thread to finish. If there are a small number of refs, that's OK; the demuxer thread writes into the pipe buffer, sees EOF from the server, and quits. But if there are a large number of refs, it may block on write() back to the main thread, leading to a deadlock (the main thread is waiting for the demuxer to finish, the demuxer is waiting for the main thread to read).

We can break this deadlock by closing the pipe between the demuxer and the main thread before calling finish_async(). Then the demuxer gets a write() error and exits.

The non-error case usually just works, because we will have read all of the data from the other side. We do close demux.out already, but we only do so _after_ calling finish_async(). This is OK because there shouldn't be any more data coming from the server. But technically we've only read to a flush packet, and a broken or malicious server could be sending more cruft. In such a case, we would hit the same deadlock. Closing the pipe first doesn't affect the normal case, and means that for a cruft-sending server, we'll notice a write() error rather than deadlocking.

Note that when write() sees this error, we'll actually deliver SIGPIPE to the thread, which will take down the whole process (unless we're compiled with NO_PTHREADS). This isn't ideal, but it's an improvement over the status quo, which is deadlocking. And SIGPIPE handling in async threads is a bigger problem that we can deal with separately.

A simple reproduction for the error case is below. It's technically racy (we could exit the main process and take down the async thread with us before it even reads the status), though in practice it seems to fail pretty consistently.

    git init repo &&
    cd repo &&
    # make some commits; we need two so we can simulate corruption
    # in the history later.
    git commit --allow-empty -m one &&
    one=$(git rev-parse HEAD) &&
    git commit --allow-empty -m two &&
    two=$(git rev-parse HEAD) &&
    # now make a ton of refs; our goal here is to overflow the pipe buffer
    # when reporting the ref status, which will cause the demuxer to block
    # on write()
    for i in $(seq 20000); do
    	echo "create refs/heads/this-is-a-really-long-branch-name-$i $two"
    done |
    git update-ref --stdin &&
    # now make a corruption in the history such that pack-objects will fail
    rm -vf .git/objects/$(echo $one | sed 's}..}&/}') &&
    # and then push the result
    git init --bare dst.git &&
    git push --mirror dst.git
Signed-off-by: Jeff King <peff@peff.net>
---
Even though the SIGPIPE isn't great, it's certainly better
than a deadlock.  So if we had to take just this one for
"maint" (e.g., because the SIGPIPE stuff causes problems on
Windows), I think it's still worth doing (and is why I stuck
this patch at the front of the series).

One alternative would be to add async_cancel() which would run pthread_cancel() for the threaded case, and kill() for the non-threaded. That helps the error case, but makes the non-error case a bit weird (if the thread _isn't_ blocking on write to us, we want to get the real status code, rather than canceling it. But we don't have any way of knowing which of _cancel() or finish() to call).

 send-pack.c | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)
Show changes to send-pack.c +4 −2
diff --git a/send-pack.c b/send-pack.c
index 047bd18..fc27db6 100644
--- a/send-pack.c
+++ b/send-pack.c
@@ -531,8 +531,10 @@ int send_pack(struct send_pack_args *args,
 				close(out);
 			if (git_connection_is_socket(conn))
 				shutdown(fd[0], SHUT_WR);
-			if (use_sideband)
+			if (use_sideband) {
+				close(demux.out);
 				finish_async(&demux);
+			}
 			fd[1] = -1;
 			return -1;
 		}
@@ -551,11 +553,11 @@ int send_pack(struct send_pack_args *args,
 		packet_flush(out);
 
 	if (use_sideband && cmds_sent) {
+		close(demux.out);
 		if (finish_async(&demux)) {
 			error("error in sideband demultiplexer");
 			ret = -1;
 		}
-		close(demux.out);
 	}
 
 	if (ret < 0)
-- 
2.8.1.512.g4e0a533
Jeff King· Apr 19, 2016, 22:49 UTC · re: Jeff King · lore

[PATCH 2/5] run-command: teach async threads to ignore SIGPIPE

Async processes can be implemented as separate forked processes, or as threads (depending on the NO_PTHREADS setting). In the latter case, if an async thread gets SIGPIPE, it takes down the whole process. This is obviously bad if the main process was not otherwise going to die, but even if we were going to die, it means the main process does not have a chance to report a useful error message.

There's also the small matter that forked async processes will not take the main process down on a signal, meaning git will behave differently depending on the NO_PTHREADS setting.

This patch fixes it by adding a new flag to "struct async" to block SIGPIPE just in the async thread. In theory, this should always be on (which makes async threads behave more like async processes), but we would first want to make sure that each async process we spawn is careful about checking return codes from write() and would not spew endlessly into a dead pipe. So let's start with it as optional, and we can enable it for specific sites in future patches.

The natural name for this option would be "ignore_sigpipe", since that's what it does for the threaded case. But since that name might imply that we are ignoring it in all cases (including the separate-process one), let's call it "isolate_sigpipe". What we are really asking for is isolation. I.e., not to have our main process taken down by signals spawned by the async process. How that is implemented is up to the run-command code.

Signed-off-by: Jeff King <peff@peff.net>
---
This is our first use of pthread_sigmask, and I think Windows will have
to come up with something for this in compat/. I don't know how SIGPIPE
works there at all, so it's possible that we can just turn this into a
noop. Worst case it could probably block SIGPIPE for the whole process.

Note also that by blocking, we may end up with a pending SIGPIPE signal (so if were ever to unblock, it would get delivered). We can unqueue it with sigwaitinfo(), but I _think_ it shouldn't matter. We never unblock, but just kill the thread, and the pending signal should be killed with it.

At least that's my understanding. This is the first time I've worked with signals and threads.

 run-command.c | 10 ++++++++++
 run-command.h |  1 +
 2 files changed, 11 insertions(+)
Show changes to 2 files +11 −0

run-command.c, run-command.h

diff --git a/run-command.c b/run-command.c
index 8c7115a..e4593cd 100644
--- a/run-command.c
+++ b/run-command.c
@@ -590,6 +590,16 @@ static void *run_thread(void *data)
 	struct async *async = data;
 	intptr_t ret;
 
+	if (async->isolate_sigpipe) {
+		sigset_t mask;
+		sigemptyset(&mask);
+		sigaddset(&mask, SIGPIPE);
+		if (pthread_sigmask(SIG_BLOCK, &mask, NULL) < 0) {
+			ret = error("unable to block SIGPIPE in async thread");
+			return (void *)ret;
+		}
+	}
+
 	pthread_setspecific(async_key, async);
 	ret = async->proc(async->proc_in, async->proc_out, async->data);
 	return (void *)ret;
diff --git a/run-command.h b/run-command.h
index de1727e..11f76b0 100644
--- a/run-command.h
+++ b/run-command.h
@@ -116,6 +116,7 @@ struct async {
 	int proc_in;
 	int proc_out;
 #endif
+	int isolate_sigpipe;
 };
 
 int start_async(struct async *async);
-- 
2.8.1.512.g4e0a533
Johannes Sixt· Apr 21, 2016, 05:15 UTC · re: Jeff King · lore

Re: [PATCH 2/5] run-command: teach async threads to ignore SIGPIPE

Am 20.04.2016 um 00:49 schrieb Jeff King:
> This is our first use of pthread_sigmask, and I think Windows will have
> to come up with something for this in compat/. I don't know how SIGPIPE
> works there at all, so it's possible that we can just turn this into a
> noop. Worst case it could probably block SIGPIPE for the whole process.

There is no SIGPIPE on Windows. write() always returns EPIPE as if SIGPIPE was ignored.

We'll have to make pthread_sigmask() a no-op.
-- Hannes
Jeff King· Apr 21, 2016, 05:18 UTC · re: Johannes Sixt · lore

Re: [PATCH 2/5] run-command: teach async threads to ignore SIGPIPE

On Thu, Apr 21, 2016 at 07:15:26AM +0200, Johannes Sixt wrote:
Show 10 quoted lines
> Am 20.04.2016 um 00:49 schrieb Jeff King:
> >This is our first use of pthread_sigmask, and I think Windows will have
> >to come up with something for this in compat/. I don't know how SIGPIPE
> >works there at all, so it's possible that we can just turn this into a
> >noop. Worst case it could probably block SIGPIPE for the whole process.
> 
> There is no SIGPIPE on Windows. write() always returns EPIPE as if SIGPIPE
> was ignored.
> 
> We'll have to make pthread_sigmask() a no-op.

Great, thanks for clarifying. We can also #ifdef out the whole block there if it's easier, but it looks like you already have noop implementations for sigset, et al. So adding a noop pthread_sigmask() should be enough.

-Peff
Jeff King· Apr 19, 2016, 22:50 UTC · re: Jeff King · lore

[PATCH 3/5] send-pack: isolate sigpipe in demuxer thread

If we get an error from pack-objects, we may exit send_pack() early, before reading the server's status response. In such a case, we may racily see SIGPIPE from our async demuxer (which is trying to write that status back to us), and we'd prefer to continue pushing the error up the call stack, rather than taking down the whole process with signal death.

This is safe to do because our demuxer just calls recv_sideband, whose data writes are all done with write_or_die(), which will notice SIGPIPE.

We do also write sideband 2 to stderr, and we would no longer die on SIGPIPE there (if it were piped in the first place, and if the piped program went away). But that's probably a good thing, as it likewise should not abort the push process at all (neither immediately by signal, nor eventually by reporting failure back to the main thread).

Signed-off-by: Jeff King <peff@peff.net>
---
 send-pack.c | 1 +
 1 file changed, 1 insertion(+)
Show changes to send-pack.c +1 −0
diff --git a/send-pack.c b/send-pack.c
index fc27db6..37ee04e 100644
--- a/send-pack.c
+++ b/send-pack.c
@@ -518,6 +518,7 @@ int send_pack(struct send_pack_args *args,
 		demux.proc = sideband_demux;
 		demux.data = fd;
 		demux.out = -1;
+		demux.isolate_sigpipe = 1;
 		if (start_async(&demux))
 			die("send-pack: unable to fork off sideband demultiplexer");
 		in = demux.out;
-- 
2.8.1.512.g4e0a533
Jeff King· Apr 19, 2016, 22:50 UTC · re: Jeff King · lore

[PATCH 4/5] fetch-pack: isolate sigpipe in demuxer thread

In commit 9ff18fa (fetch-pack: ignore SIGPIPE in sideband demuxer, 2016-02-24), we started using sigchain_push() to ignore SIGPIPE in the async demuxer thread. However, this is rather clumsy, as it ignores SIGPIPE for the entire process, including the main thread. At the time we didn't have any per-thread signal support, but we now we do. Let's use it.

Signed-off-by: Jeff King <peff@peff.net>
---
 fetch-pack.c | 4 +---
 1 file changed, 1 insertion(+), 3 deletions(-)
Show changes to fetch-pack.c +1 −3
diff --git a/fetch-pack.c b/fetch-pack.c
index f96f6df..b501d5c 100644
--- a/fetch-pack.c
+++ b/fetch-pack.c
@@ -15,7 +15,6 @@
 #include "version.h"
 #include "prio-queue.h"
 #include "sha1-array.h"
-#include "sigchain.h"
 
 static int transfer_unpack_limit = -1;
 static int fetch_unpack_limit = -1;
@@ -674,10 +673,8 @@ static int sideband_demux(int in, int out, void *data)
 	int *xd = data;
 	int ret;
 
-	sigchain_push(SIGPIPE, SIG_IGN);
 	ret = recv_sideband("fetch-pack", xd[0], out);
 	close(out);
-	sigchain_pop(SIGPIPE);
 	return ret;
 }
 
@@ -701,6 +698,7 @@ static int get_pack(struct fetch_pack_args *args,
 		demux.proc = sideband_demux;
 		demux.data = xd;
 		demux.out = -1;
+		demux.isolate_sigpipe = 1;
 		if (start_async(&demux))
 			die("fetch-pack: unable to fork off sideband"
 			    " demultiplexer");
-- 
2.8.1.512.g4e0a533
Jeff King· Apr 19, 2016, 22:51 UTC · re: Jeff King · lore

[PATCH 5/5] t5504: drop sigpipe=ok from push tests

These were added by 8bf4bec (add "ok=sigpipe" to test_must_fail and use it to fix flaky tests, 2015-11-27) because we would racily die via SIGPIPE when the pack was rejected by the other side.

But since we have recently de-flaked send-pack, we should be able to tighten up these tests (including re-adding the expected output checks).

Signed-off-by: Jeff King <peff@peff.net>
---
Would be nice to reference HEAD^2 by name here, but of
course I don't know its final commit sha1 yet.
 t/t5504-fetch-receive-strict.sh | 10 ++++------
 1 file changed, 4 insertions(+), 6 deletions(-)
Show changes to t/t5504-fetch-receive-strict.sh +4 −6
diff --git a/t/t5504-fetch-receive-strict.sh b/t/t5504-fetch-receive-strict.sh
index a3e12d2..44f3d5f 100755
--- a/t/t5504-fetch-receive-strict.sh
+++ b/t/t5504-fetch-receive-strict.sh
@@ -100,11 +100,8 @@ test_expect_success 'push with receive.fsckobjects' '
 		git config receive.fsckobjects true &&
 		git config transfer.fsckobjects false
 	) &&
-	test_must_fail ok=sigpipe git push --porcelain dst master:refs/heads/test >act &&
-	{
-		test_cmp exp act ||
-		! test -s act
-	}
+	test_must_fail git push --porcelain dst master:refs/heads/test >act &&
+	test_cmp exp act
 '
 
 test_expect_success 'push with transfer.fsckobjects' '
@@ -114,7 +111,8 @@ test_expect_success 'push with transfer.fsckobjects' '
 		cd dst &&
 		git config transfer.fsckobjects true
 	) &&
-	test_must_fail ok=sigpipe git push --porcelain dst master:refs/heads/test >act
+	test_must_fail git push --porcelain dst master:refs/heads/test >act &&
+	test_cmp exp act
 '
 
 cat >bogus-commit <<\EOF
-- 
2.8.1.512.g4e0a533
Junio C Hamano· Apr 20, 2016, 21:17 UTC · re: Jeff King · lore

Re: [PATCH 0/5] fix deadlock in git-push

Jeff King <peff@peff.net> writes:
Show 14 quoted lines
> The first patch below fixes the deadlock. Unfortunately, it turns it
> into a likely SIGPIPE death. Which is an improvement, but not ideal.
>
> Patches 2 and 3 address that by fixing the way we handle SIGPIPE in
> async threads.
>
> Patches 4 and 5 are cleanups to earlier topics that are enabled by the
> new SIGPIPE handling.
>
>   [1/5]: send-pack: close demux pipe before finishing async process
>   [2/5]: run-command: teach async threads to ignore SIGPIPE
>   [3/5]: send-pack: isolate sigpipe in demuxer thread
>   [4/5]: fetch-pack: isolate sigpipe in demuxer thread
>   [5/5]: t5504: drop sigpipe=ok from push tests
Thanks for a very well explained series.

We do not call finish_async (rather, we do not use async) from that many places, and from a cursory look this codepath is the only case where we may encounter this kind of deadlock (the ones in receive-pack is about relaying the error messages back to the other end over sideband multiplexing)?

Jeff King· Apr 20, 2016, 21:51 UTC · re: Junio C Hamano · lore

Re: [PATCH 0/5] fix deadlock in git-push

On Wed, Apr 20, 2016 at 02:17:16PM -0700, Junio C Hamano wrote:
Show 24 quoted lines
> Jeff King <peff@peff.net> writes:
> 
> > The first patch below fixes the deadlock. Unfortunately, it turns it
> > into a likely SIGPIPE death. Which is an improvement, but not ideal.
> >
> > Patches 2 and 3 address that by fixing the way we handle SIGPIPE in
> > async threads.
> >
> > Patches 4 and 5 are cleanups to earlier topics that are enabled by the
> > new SIGPIPE handling.
> >
> >   [1/5]: send-pack: close demux pipe before finishing async process
> >   [2/5]: run-command: teach async threads to ignore SIGPIPE
> >   [3/5]: send-pack: isolate sigpipe in demuxer thread
> >   [4/5]: fetch-pack: isolate sigpipe in demuxer thread
> >   [5/5]: t5504: drop sigpipe=ok from push tests
> 
> Thanks for a very well explained series.
> 
> We do not call finish_async (rather, we do not use async) from that
> many places, and from a cursory look this codepath is the only case
> where we may encounter this kind of deadlock (the ones in
> receive-pack is about relaying the error messages back to the other
> end over sideband multiplexing)?

Yeah, I checked the other demuxer in fetch-pack, but it does not have any early returns like this (it just dies :) ).

It does not do an explicit close on demux.out, but I think it is effectively closed when we hand it off to index-pack/unpack-objects via cmd.in.

Arguably finish_async() should "close(demux.out)" itself, but that felt like an ownership violation. Yes, that's how "struct async" passes out the descriptor, but the caller is then expected to handle it, and correct callers will typically have closed it themselves, handed it off to a sub-process, etc. Closing it in finish_async() runs the risk that we just call close() on a descriptor number that is either unattached, or attached to some random other thing.

-Peff

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